Agaricus bisporus var. bisporus H97: AGABI2DRAFT212972
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Entry
AGABI2DRAFT212972 CDS
T03140
Symbol
AGABI2DRAFT_212972
Name
(RefSeq) hypothetical protein
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03420
Nucleotide excision repair
abv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGABI2DRAFT212972 (AGABI2DRAFT_212972)
03460 Fanconi anemia pathway
AGABI2DRAFT212972 (AGABI2DRAFT_212972)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abv03032
]
AGABI2DRAFT212972 (AGABI2DRAFT_212972)
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT212972 (AGABI2DRAFT_212972)
DNA replication proteins [BR:
abv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
AGABI2DRAFT212972 (AGABI2DRAFT_212972)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
AGABI2DRAFT212972 (AGABI2DRAFT_212972)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
18084736
NCBI-ProteinID:
XP_006457524
JGI:
Agabi_varbisH97_2_212972
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MSTLLPFHKSILEEIHDPATSDLLILARGLGLRRIICTLMKIYDSNKNLVLLVNATQEEE
SAIGEELGIMGCRRPGLRVIGYETSSKDRQNLYKQGGLMSVTSRILVVDMLQNDIPVHLI
TGMLILHAERVTPTVIEAFIVRLFREKNRDGFVKAFTDQPEHITSGMSPLKNVMKELQLR
RAHLYPRFHEHINKTLERRRADVVELSQPLSQSMSEIHHAIIQCISTTLAELKRSNKELE
LDDFNVENTYFRSFEGIVRSRLSPVWHKVGPKTKQLINDLNVLRQLLFYLLSYDALSFHA
YLETIIESNTISARTGGPKVHQSPWLLTDAANIIFEVAKRRCFIISAIPKETAVTHQPME
VDDQDAWDLLDELEQPGTNNQGKRKLHERPAWLPKNIQPVLEEQPKWDLLSEILLEIESE
IIHLSSNKNISQRGTDTVLIMTSSTRSCDLIQDFLDTMDPDAESGWKGRVMMRRRLKGYL
GWRGRLNPDDNNNFATTNQAGMTSRKGKEREDNLSEALKKKDREKMEKSASRRRTRGGAP
STGGGRSATSDKASPEVIDVDKPGDMTLWSKDDPDLAATLMNASNDFALDLLTQDEFESS
YGLLPPEQTIVIRACSDDTDDRMLAEIQPRFIVMFEPSVEFIRRVEVYRSSYPGMAVRVY
HMVYADSCEEHRYLAAIRKEKESFERLVKERGSMLLTLEERRKSGGGGEGENVIRTISTR
LAGGRRELTTEPPKIIVDMREFRSALPSLLHAAQLLVVPATLTVGDYILTPDICVERKSL
SDLVSSFNSGRLYTQCEFMSVHYKHPVLLIEFEEDKSFSLETISELKNYAKPTQKYPNKP
SRPSTFNSLSSEPPSSVTTIQSKLVLLTLSFPRLRTIWSQSPYATAEIFKDLKSNQPEPD
PIKAITIGADGDDPDDVGKGFNTVAEELVRALPSIGSGGLASSSGIVNTVMRRCKNVREL
CELKEDEVKELVGVGPGKVLYEFLHKGE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctcctccccttccacaagtctattctcgaggaaattcatgaccctgcaacg
agcgaccttctcattctcgcccgaggccttgggctccggcgtatcatatgcacgctcatg
aagatctatgactctaataaaaaccttgttttgttagtcaatgccacgcaagaggaggaa
tctgctatcggcgaagagctagggatcatggggtgtcgaaggccaggactgcgcgttatt
ggatatgaaacttcgagtaaagacagacagaacctttacaaacagggagggctcatgtcc
gtaacatcgcgaatccttgttgttgatatgttgcaaaacgacattcccgtgcatctcatc
acaggaatgctcatacttcacgcagagagggttacaccgacggtcatcgaagccttcatc
gtccgcctctttcgcgagaagaacagagacgggttcgtcaaagcgttcacagatcagcca
gagcatataaccagtggcatgtcgcccctcaagaacgtgatgaaggagttgcaactgcgg
agagcgcacttgtatcctcgatttcacgagcacattaacaagacgcttgagcgacgacgt
gccgacgtggttgaattatctcaaccgctctcgcaatccatgtcagaaatccatcatgcc
ataatccaatgcatctcgactactcttgcagaactcaaacggtctaataaagaactggag
ttagatgatttcaatgtcgagaatacgtattttcgttcatttgaaggcattgtgcgatca
cgattgtctccggtatggcataaagtcggtccaaaaacgaaacaactcatcaatgacttg
aacgtcctacgtcaactcctcttctatttgttatcatatgatgccctttcatttcacgcc
tatttggagaccataattgaatcaaatactatctctgcaagaacgggcgggcccaaagta
catcaatcgccatggcttctgacggatgctgccaacatcatattcgaagtggccaagcga
cgttgtttcatcatttccgcaattccgaaggagactgcagtaacgcaccagcctatggaa
gtagacgatcaagacgcgtgggatctcctggacgaacttgaacagcctggaacgaacaat
caaggaaagagaaaactacatgagcgcccggcatggctacccaagaatattcagcccgta
ctcgaagaacaaccgaaatgggatttactatcggagattcttcttgaaatcgagtcggaa
attatacatctttccagtaacaagaatataagtcaacgaggaacagacactgtacttatt
atgacatcgtctacgaggagttgcgatttgatacaagattttttggatacgatggatccg
gatgcggagagtggttggaagggaagggtgatgatgaggcgaagattgaaaggatatctt
ggctggagaggaagactcaatcccgatgataacaataattttgccacgacgaatcaggct
gggatgacgagtcggaagggaaaagaaagggaggataacttgagcgaagcattaaagaag
aaggacagagagaagatggagaagtctgcgagtagacgaaggacgagaggcggagcacct
tcaacaggtggaggaaggagtgctacgagtgataaggcgagcccggaggtgattgacgtg
gataagcctggtgatatgacactgtggtcgaaggatgatccggatttggctgcgacgctc
atgaacgccagtaacgatttcgcacttgatcttctcacacaggatgaatttgaatcctcg
tatggattattacctcctgaacaaacgatcgtgattcgagcgtgttcggatgatacagac
gatcgtatgttggctgaaattcaacctcgattcatcgttatgttcgaaccttcagtcgag
ttcattcgacgagtcgaggtttatcgcagctcgtatccgggcatggcagtacgagtgtat
cacatggtatacgccgactcatgtgaagaacatcggtatttggcggcgattagaaaagag
aaagagtcatttgagaggttggttaaagagcgtggatctatgttgctgacacttgaagag
cgacgaaaatctggtggaggtggagaaggggagaatgtaatcagaacgattagtacgaga
cttgcgggtgggaggagggaattgactactgagcctcccaagatcatcgtggacatgcgg
gaatttcgatcagcattgccttcgctcttacacgcagcgcagttacttgtcgtcccagcg
actttaactgtgggagattatatccttactccggatatttgtgtcgagcggaagagttta
tcagatttggtgtcgagttttaacagcggacgattatacacccaatgtgaattcatgtcc
gtccattacaaacatcccgtacttttaatcgaattcgaagaagacaaatcattttccctc
gaaacgatttccgagctcaaaaactacgcgaagccgactcaaaaataccccaacaaaccg
agtagaccatcaaccttcaattctttatccagtgaacccccatcctcagttacaactatc
caatctaagctcgttctgctcacactctcgttcccgagattacgaaccatctggtcacaa
tccccatacgccacagcagaaatattcaaagaccttaaaagtaatcaaccagagccggat
cctatcaaagctattactattggtgctgatggggatgatcctgatgacgttgggaaaggg
tttaatactgttgcagaggagttggtgagggctttgccgagtattggtagtggaggtttg
gcaagttcgagtggaatcgtgaatactgtgatgaggaggtgtaagaatgtgagagaactt
tgtgagttgaaggaggatgaggtgaaggaattggtcggtgttggacctgggaaggtgctt
tatgagtttctgcataagggagagtga
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integrated database retrieval system
