Agaricus bisporus var. bisporus H97: AGABI2DRAFT216556
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Entry
AGABI2DRAFT216556 CDS
T03140
Symbol
AGABI2DRAFT_216556
Name
(RefSeq) hypothetical protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI2DRAFT216556 (AGABI2DRAFT_216556)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT216556 (AGABI2DRAFT_216556)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI2DRAFT216556 (AGABI2DRAFT_216556)
Spliceosome [BR:
abv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AGABI2DRAFT216556 (AGABI2DRAFT_216556)
Complex C
U5 SnRNP specific factors
AGABI2DRAFT216556 (AGABI2DRAFT_216556)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DDX23
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
18084893
NCBI-ProteinID:
XP_006458200
JGI:
Agabi_varbisH97_2_216556
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MASNRSEPLSIESLLQKQREEKEAAAKPKFLTKEERAKIAIAKRAQEIKEQKVRDEAVRK
DKETLEREAEDLAAKERNNRYGSGRYDDRYSHSDRDRDTRDRYSRRERENRGRPPPPPPP
ADDRRRENYQNVPTGPRADRGKNTPNSTHEHTPSSSMPPPPVPNSNSNGTLPESSLPYAP
PMSDNDLTAIRSRYLGVDKKKRKIRKMNDRKFVFDWDAQDDTFAEDSPVAVGSNRQGAQI
MFGRGHLAGMDDNGGPAVRRMPGGDNLADAMERRKATKVGIDERHWTDKPLVEMKERDWR
IFREDFSISARGGNIPHPLRSWRESQIPESILECIDRIGYKEPSPIQRQAIPIGLQNRDI
IGIAETGSGKTAAFVIPMLAFIGNLPLFTDDNRHLGPYSLILAPTRELAQQIESEARKFA
GPLGYKCVSIVGGRAVEEQQFNLREGAEIVIATPGRLKDVIERHVLVLSQCRYVVMDEAD
RMVNLGFEADLTFILDALPAETMQGEDPGEQMDVDGETLVKKGRTRVTTLFSATMPAAVE
RLARKYLKKPAVITIGEAGRAVDTVEQRVEFVGGDEKKKMRILEILNSNQYSPPIIVFVN
QKKTADMVAKDLSRGGWNAATLHSGKNQEQREASLQSLRNGESDVLVATDLAGRGIDVQD
VSLVINFQMANTIEAYVHRIGRTGRAGKLGTSITFLTNDDEEVMYDLKQEISKSPVSKVP
VELAKHEAAQHKVSREMKRKRDAEDQG
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaaccgctcagagccgctctccatcgagtccctcctccaaaaacagcgtgag
gagaaagaggctgccgccaagcctaaattcttaaccaaggaagaacgagccaaaatcgct
atagcaaaacgtgctcaagaaatcaaagaacaaaaggtgcgagatgaggccgttcgaaaa
gacaaggaaaccctggaacgtgaagcagaagatttggccgccaaagaacgcaacaacaga
tacggtagtggtcgatatgacgacaggtattcccattcagatcgtgatagagatactagg
gatcgttatagtaggcgagaacgagagaatagaggtcgaccccctccaccgccacccccc
gcagacgaccgtcgtcgcgagaattatcagaacgtacccactggtcctcgcgcagaccga
ggcaagaatacgccaaatagcactcatgagcatacaccctcttcatctatgccaccgcca
cccgtccccaatagtaacagcaatggcactttacccgaatcgtcgcttccctacgctcca
cccatgtccgataatgacctcaccgccattcgatctcggtatctcggagtagacaagaag
aagcgcaaaatcagaaaaatgaatgacagaaagtttgttttcgattgggacgctcaagac
gatacatttgccgaagactcgcctgtggcagtagggagtaataggcaaggcgctcaaatc
atgtttggcaggggccacctggcgggcatggatgacaacggtggaccagctgtgaggaga
atgcctggaggggataacctagccgatgcaatggaacggcgaaaggccactaaagttggt
atcgacgaaaggcattggacagacaaaccgcttgttgagatgaaagaacgcgactggcgt
atattccgggaagactttagtatttccgctagaggtggcaatatccctcacccgcttagg
tcgtggagggaatcgcaaattcctgaatctatcctcgaatgtatcgatcgtattggctac
aaagaaccttcccctatccagaggcaggccataccaattggtcttcaaaatcgtgatatc
ataggtatagctgaaacaggttcgggtaaaacggccgcctttgtgattccaatgcttgct
ttcattggcaacttgccgctctttacggatgacaaccgacatctagggccctattcctta
attctcgccccaacccgtgaattagcacagcaaatcgagagcgaagcgcgcaagtttgct
ggtcccttgggatacaaatgtgtctcgatcgtcggaggtcgcgctgtcgaggaacaacaa
ttcaatttacgtgaaggtgcggaaattgtgatagcgacgccaggtcgtctcaaggatgta
attgaacggcatgtcctcgttctctcacaatgtcgatatgtggtcatggacgaagccgac
cgtatggtcaacctcggttttgaagccgacttgaccttcattttggacgctttgccagca
gaaactatgcagggtgaggaccctggcgagcagatggacgtggatggcgaaacattggtc
aagaaaggtcgaactcgcgttaccactttattctcagctaccatgccagccgcggttgag
cgtctggctagaaaatacctcaagaagcctgctgttattactattggtgaagctggccgt
gcggttgacacggtggaacaacgagttgagttcgtcggtggagacgaaaagaagaagatg
cgcatactggaaatactcaacagcaatcaatactcacctcctattatcgtatttgtgaac
caaaagaaaacagccgacatggtcgctaaagacttgtcccggggtggatggaatgctgcg
accttacattctggtaaaaaccaagaacaaagagaagcatcactacagtctttgcgcaat
ggagaatcggatgttctggttgcgaccgacttggctggccgtggcattgatgtccaagat
gttagccttgtgatcaacttccaaatggcgaataccatagaggcttatgtccaccgcata
ggtcgtaccggtcgtgctggaaaattgggcacttctattactttcctgacgaatgatgat
gaagaagtcatgtacgatctcaagcaagaaatttcaaaaagtcctgtatcaaaggttcca
gttgaacttgctaagcatgaagctgctcagcacaaagtctcgcgggagatgaaaaggaaa
cgtgacgccgaagatcaaggt
DBGET
integrated database retrieval system
