Agaricus bisporus var. bisporus H97: AGABI2DRAFT219047
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Entry
AGABI2DRAFT219047 CDS
T03140
Symbol
AGABI2DRAFT_219047
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI2DRAFT219047 (AGABI2DRAFT_219047)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT219047 (AGABI2DRAFT_219047)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGABI2DRAFT219047 (AGABI2DRAFT_219047)
Spliceosome [BR:
abv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AGABI2DRAFT219047 (AGABI2DRAFT_219047)
Complex C
U5 SnRNP specific factors
AGABI2DRAFT219047 (AGABI2DRAFT_219047)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
PhoH
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
18085003
NCBI-ProteinID:
XP_006459706
JGI:
Agabi_varbisH97_2_219047
LinkDB
All DBs
Position
Unknown
AA seq
2111 aa
AA seq
DB search
MGSRVVRAAPKDLEKKKRKAAESHEHAEKPARRKAEGAGFGPADIIESTQGVEGLTYRPR
TLETREVYELMLSSVHTALGDQAQDIVRSAADAVLESLKSDALKDFDKKREIEDVLGPIT
GEQFSQLLNLSKKITDYNADDEVVADVDMERKDAEIDGEVGVAVVFDEEEQEEEEDEGYE
IKDESDGEEEEEDEGDKEDATGEEAPGEEGMVIGGEGRDKARKAQKDIISPHTVDGFWVQ
RQVSEIYPDPVTAADKAASVLSILGSESNLRDCENQLMELFDYQSHHIIQIFIKNRDVVV
WCTKLMRSDADERVNVEVAMREKGVGWILRELAGGQDKKKTTDDMDVDEAAKTEVPKTAT
LAPGSTVQPKRVVDLESLAFSQGGHLMSNKKCKLPDGSFKRSKKGYEEIHVPAPKSKPVT
DNELVPVSSLPAWAREAFTVPRLNRVQSKLFPVAFGTDEPILLCAPTGAGKTNVAMLTIL
NELAKWRDEETGQFDLDGFKIIYVAPMKALVQEMVGNFQARLKVFGVKVGELTGDSQMTK
QQIAETQIIVTTPEKWDVITRKSTDTSYTNLVRLVIIDEIHLLHDDRGPVLEAIVSRTIR
RMEQTNEYVRLVGLSATLPNYQDVATFLRVDEKKGLFYFDATYRPCALQQQFIGITEKKA
IKRYQVMNEVCYEKVLDQAGKNQTLVFVHSRKETAKTAKFLRDMAMEKETITQFVKAEGA
TREILTEESSNAKDRNLVDLLPFGFAIHHAGMSREDRTLVEDLFSEGHVQVLVCTATLAW
GVNLPAHTVIIKGTQIYNPEKGRWVELSSQDVLQMLGRAGRPQYDTFGEGVIITNHQELQ
YYLSLLNQQLPIESQFVAKLADNLNAEVVLGTIRNRDEAVQWLGYTYLYVRMLKDPGLYS
VGVDYQDDAGLVQKRADLIHSAAVMLEKCQLLKYERSSGRFQSTELGKIASHYYVTYNSM
LVYNKHLKPSMSTLELFRVFALSNEFKLIPVRQEEKLELVKLLERVPIPVKEGVEEPAAK
INVLLQAYISQLKLDGFVLVADMVFVQQSAGRILRAMFEICLKRGWAVPAKAALDLCKMV
EKRMWGSMTPLRQFRGVPTEVVRKAEGKQFPWYRYFDLTPPEIGELIGIPNAGKLVHRLV
HSFPKLQLSAQVQPITRSLLRIDLSIIPDFRWDEKIHGAAETFIILVEDVDGEVILFHDN
FVLRQRYAEDEHNVTITVPMSEPVPPNYYISIISDRWLQSETRLPISFKHLILPAKFPPP
TALLELQRLPISALHNKEFETIYESTVTDFNKIQTQVFQALYMSDENVFVGAPTGSGKTV
CAEFALLRLWSKREQPRAVCIEPFQEMVDQRVEEWKRKFGKLQGGKEIVGLTGETSADLR
LLEKADVVVCTPTQWDVLSRRWRQRKNVQNIGLLIADEIQQVGGEVGPTYEVVISRTRYV
SFQTKVQTRIVACGVSLANAEDLGEWIGAKSHTIFNFSPNARPLNMEIHIQSFTIPHFPS
LMIAMSKPAYLAILEYSPSKPVIVFVPSRRQCRLTVDDLVTHCAADDDPERFLYTELDKL
QPHLDHLSDKGLIETLKHGIGYYHEALSRQDKIIVQRLFESGAIQVLVASKDTAWSLPVA
SHMVIIMGVQSYEGKEHRYVDYPVMDVLQMMGRACRPQEDTDSRCVLMCQQTRKDFYKKF
LAEGLPIESHLPTHLLHDYFLAEIAVKTIENKQDAMDILTWTYFYRRMTQNPNYYNLHNV
SHQHLSDHLSELVENTLNDLVNSKCISIEDEMDVSALNLGMIAAYYNISYVTVEVYTLSL
KERTKLKGLLEVVSSSAEFETIPIRRHEDVLLRRIYDRVPVKLDRADFEAPHFKTFLLLQ
AHFSRLQLPPDLAADQTLILEKILNLLSACVDVMSSNAWLNALGAMDLSQMCVQGVWEKD
SPLKQIPHFEPDVIQRCKEADIETVYDIMEMEDDDRTKLLQMSSTQMRDVAMFVNSYPTL
DVSYDLAKGDYTAGAPILMKVTLARDIDDDDEESDQTVVAPFYHSKKLANWWVVLGDRDS
RQLYVIKKVTVTKNLVVKLEFTLPKGTHRPRLYVVCDSYVGADHDIELEPIEVAEGEESD
SDEEMDSDDDE
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgagtcgtccgtgctgctccgaaggatctcgaaaagaagaagcggaaagcc
gcagagtcacacgaacatgccgaaaagccagccaggcgcaaggctgaaggcgccggtttt
ggtcccgccgacatcatcgaatcgacccagggcgttgaaggtttaacgtaccgacccaga
acactggaaacgcgcgaggtctacgagctcatgctctcttcagttcataccgctctaggt
gaccaggcccaggacatcgtccggagtgctgctgatgccgtcctcgagtcgttgaagagt
gacgcgctcaaggatttcgacaaaaagcgcgaaatagaagacgtccttggccctatcacc
ggcgagcagttctcccaactcctcaacctgtcaaaaaagattaccgactacaacgccgat
gatgaagtcgttgccgacgtcgatatggagcgcaaagatgctgagattgacggcgaagtc
ggcgttgctgtcgttttcgacgaggaggagcaggaagaagaggaagacgagggttatgag
atcaaagacgagtcggatggcgaggaagaggaggaggatgaaggtgacaaagaagacgct
accggtgaggaggctccaggcgaggaaggaatggttataggtggcgaaggacgcgacaaa
gcgcgtaaagctcaaaaggatatcatctcccctcatactgtcgacggtttctgggtacag
cggcaagtctcagaaatatacccagaccccgtcaccgccgccgacaaggccgcctccgtt
ctctccatccttggctcagagtcaaatctccgtgactgcgagaaccagctgatggagctt
ttcgactaccagagtcatcacatcatccaaatcttcatcaaaaatcgcgacgtcgtcgtc
tggtgcaccaaactcatgcgtagcgatgctgatgaacgcgtcaacgtcgaggtggctatg
agagagaaaggcgtgggttggattctgcgagaattagctggtggtcaagataagaagaaa
acgacggacgacatggatgtcgacgaggctgctaaaacagaagtccccaaaaccgctacc
ttggctcctggctccactgtccagcccaagcgcgtcgttgacctcgagagcttggcgttc
agccagggcggccacctcatgtcgaacaaaaagtgcaaactacccgatggttctttcaag
cgctcgaagaagggttacgaagaaattcacgtacctgctcccaaatcaaaacccgtcaca
gacaacgaactcgtccccgtatcctctctccccgcttgggcacgcgaagccttcaccgtc
ccacgtctcaaccgcgttcagagcaaactcttccctgtcgcctttggtaccgatgaaccc
attcttctctgtgcgccgacgggtgccggcaagaccaatgtcgccatgttgacaatttta
aatgaacttgcaaagtggcgtgatgaagagaccggacaattcgacctcgacggcttcaag
atcatctacgtcgctcccatgaaagccctcgtccaggaaatggtcggaaacttccaagcg
cgtctcaaagtcttcggggtcaaagtcggagagttgacaggagactctcaaatgacgaag
cagcaaatcgcggagacacaaatcatcgttaccacccccgaaaagtgggatgtcatcacg
cgcaagagtacggacacgagctataccaatctagttcgacttgtcattattgacgaaatc
catctcctccacgacgatcgtggcccagtcctcgaggccattgtttcccgtaccatccgt
cgcatggaacagacgaacgagtatgttcgtcttgtcggcctttcggcgaccctgcccaac
tatcaagatgtcgcgactttcctccgcgttgacgagaagaagggtctgttctacttcgat
gccacctaccgtccttgcgctcttcagcaacaattcattggtatcacggagaaaaaggcc
atcaagcgttatcaggttatgaatgaagtctgctatgaaaaggttctcgaccaagccgga
aagaaccaaacgctcgtattcgttcattcccgcaaagagacggccaagacggcgaagttc
cttagggatatggccatggagaaggaaacgatcacccaattcgtcaaagccgagggtgct
actcgtgaaatcctgactgaagaatcctcgaacgcgaaggataggaatctggtcgacttg
ttacctttcggtttcgctatccatcatgccggaatgtcacgcgaagatcgcacgctcgtg
gaggatctgttctctgaaggccacgttcaagtcctcgtctgtaccgccaccctcgcttgg
ggtgttaatctccccgcccacaccgtcatcatcaaaggcacccagatctacaaccccgaa
aaaggacgctgggtcgagctatcgagtcaagacgtcctgcaaatgttagggcgtgcagga
agaccccagtacgatacgtttggagaaggtgtcatcatcacgaaccaccaagagttgcaa
tattaccttagtctgttgaaccagcagctgccgatcgagagtcaattcgtagcgaagttg
gcggataatctaaacgcagaggtcgtgcttgggacgattaggaacagggacgaggcagtt
cagtggttgggatatacatatctgtacgtccgtatgctcaaagacccaggactctatagt
gtgggtgtggactaccaagacgatgctggccttgtacagaagcgtgccgatcttatccat
tcggcagctgtcatgttggagaaatgccaacttttgaagtacgaacgttcgtctggcaga
ttccagagtacggagctgggcaagatcgcgtcgcattattacgtgacctacaactcgatg
ctggtgtataacaaacaccttaagccatcaatgtcgacgttggagttattcagagtgttc
gcgctctcaaacgagttcaaattgattcctgttcgccaagaggaaaaactcgagttggta
aagcttttagaacgcgtaccgatccctgtgaaagagggcgtggaggaacccgccgcaaaa
atcaacgtcctgttacaggcgtatatatctcaattgaagctggatggattcgttttggtg
gcggatatggtattcgttcaacagtctgctggtcgtattcttcgcgcaatgttcgaaata
tgtttgaaacgtgggtgggcggtccctgcgaaggcagcgttagatttatgcaagatggtt
gaaaagaggatgtgggggtctatgacgccactgaggcagttcagaggtgtaccgactgag
gttgttaggaaggctgaaggcaaacaattcccatggtatcgctactttgatctaacgccc
cccgaaatcggagagctgattggcatcccgaacgccggcaagctggtgcaccgtctcgtc
cacagcttccccaagcttcagctatcggctcaagtccagcctatcacgaggtcccttctg
cgcatcgacctatccatcatacccgatttccggtgggacgagaaaattcacggcgctgcc
gaaacttttatcattctcgtcgaagatgtggacggcgaggtgattcttttccatgataat
ttcgttctccgtcaacgttacgccgaggatgagcacaacgttacaatcaccgtccccatg
tccgagccagtcccgcccaattactacatttccatcatctccgaccgctggctgcagtct
gagacgaggctaccaatctcattcaagcaccttatcctgccggccaagttcccgcctcct
accgcgcttctcgagcttcaacgcttaccgatttccgcgttacataacaaggaattcgaa
accatctacgagagcacggtgacggatttcaacaagattcaaacgcaagtcttccaggct
ttatatatgtctgacgaaaacgtgtttgttggtgcgcctacgggaagtggtaagactgtt
tgtgcggaatttgcacttttgcgattatggagcaagcgggaacagcccagggcggtttgt
attgaaccgttccaggagatggtggaccaacgggttgaagagtggaaaaggaagttcgga
aagttacaaggtgggaaagagattgttggattgacgggagagacgagtgcggacttgagg
ttgcttgagaaggcagatgtcgtcgtatgcacgccgacgcagtgggatgtcttgtcgaga
cgatggcgccagagaaagaacgtccagaacattggacttttgatagcggacgagatccag
caagtgggaggtgaagtagggccgacatatgaggtcgttatatcgaggacgcgctacgtt
tcgttccaaacgaaggtgcagacgcgtatcgtagcttgtggtgtttcgttggccaacgca
gaagaccttggagagtggattggtgccaaatcgcatacgatattcaacttctcgcccaat
gctcgtccgttgaacatggagatccatatccagtccttcacgatccctcatttcccttca
ctcatgatcgccatgtcgaaacccgcttacctcgctatacttgaatattcaccaagtaaa
cccgtcattgtcttcgtaccttcgcgccgccaatgccgtctgactgttgatgatctcgtc
acgcactgtgctgctgacgatgatccagagaggttcctctatacggaactggacaagctt
caacctcacttggaccatctcagtgacaagggattgattgaaacgctgaagcatgggatt
gggtactatcatgaggcacttagcaggcaggataagattattgtgcagcgcttgttcgag
tccggtgccattcaggttcttgtagcgtccaaggacactgcatggagccttcccgttgca
agtcatatggtgatcatcatgggtgtgcaatcatacgagggcaaggagcatcgctacgtt
gactatcctgtcatggacgtcttgcaaatgatgggacgcgcctgccgtccgcaagaagat
accgacagtcggtgtgttctgatgtgccaacagacgagaaaggacttctacaagaagttc
ctcgcggagggccttccgatcgagtctcatcttcccactcatttgctacacgattatttc
ttggcagagatcgcggtcaagacaattgaaaacaagcaggatgcaatggatatcctgacg
tggacgtatttctatcgccgcatgacgcaaaatccgaactactacaacttgcacaatgtc
agccatcaacacttgtctgaccatctgtcagaattagtcgaaaacacgctcaacgacctc
gtgaactcgaaatgtatatccatcgaggacgaaatggacgtttccgcccttaaccttggc
atgattgccgcctattacaatatctcttatgtgaccgttgaagtgtatacgctttcgctc
aaggaacgcaccaaactgaagggtttactcgaggttgtctcctcatccgctgaatttgag
accatccccatccgccgtcacgaagatgtactccttagacgcatctatgatcgcgtgccc
gtcaaactcgatcgcgccgatttcgaagccccacatttcaaaacattcttgctccttcaa
gcacacttctcgcgtctacaacttcctcctgatcttgctgcggatcaaaccttgattctg
gagaagatcttgaatctactgtctgcttgtgttgatgttatgtcgtcgaacgcgtggttg
aatgctctgggcgcaatggatctgtcacagatgtgcgttcagggtgtgtgggaaaaggat
tcgccattaaagcaaattcctcattttgaacccgacgtaattcagcggtgtaaagaggct
gacattgagacagtttacgacatcatggaaatggaggatgatgatcgcactaagctcttg
caaatgagctcaacgcaaatgcgtgatgtcgcaatgttcgtaaactcctacccaaccttg
gacgtgtcgtatgatctcgccaagggcgattatacagctggtgctcccatcttgatgaag
gtcactcttgcgagagatatcgatgacgacgacgaggaaagcgaccaaactgttgttgct
ccattttaccattctaaaaagcttgccaactggtgggttgtcctcggtgaccgggacagt
cggcagctgtatgttatcaaaaaggtcactgtgaccaagaacctcgtagtcaagcttgag
tttaccctgccaaagggaacccaccgaccgcggctctacgttgtgtgcgattcgtacgtc
ggtgccgatcacgatattgaattagagcctattgaagtcgctgagggagaggagagtgat
agtgacgaggagatggatagtgatgatgatgaatga
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integrated database retrieval system
