Agaricus bisporus var. bisporus H97: AGABI2DRAFT219776
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Entry
AGABI2DRAFT219776 CDS
T03140
Symbol
AGABI2DRAFT_219776
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGABI2DRAFT219776 (AGABI2DRAFT_219776)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT219776 (AGABI2DRAFT_219776)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
AGABI2DRAFT219776 (AGABI2DRAFT_219776)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
18085030
NCBI-ProteinID:
XP_006460102
JGI:
Agabi_varbisH97_2_219776
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MAPKQASMDLLFHPKKNKKSALPPPPRKTPPTPRPKPALEKEDDGELKLPDWPYQEFRLL
SSALNGWNYDVMKFDSRKPIDVSKWVGPVKLNRKDLRRDEPASEGAPKAVGPMVGPDGKP
VIGTDGKVVMIDMEGKPIHPTDATSSPKDRGKGANNAANAKKRFQKKTKQVFYVPEEVRR
LRKEERYPWVLEDSQADNKELWIGQLEDVGKAETHAFFMPAANDVFKFVPAHRWYKFQKK
LKHDLPTDTAGVEQLYTTSQKRDHQAWLASRNGGRGPSASTAAMFKAEAEGRTITIGNSL
VHDAGQSLGPGGRRLRAVDSGVDRLFGDDDEEEGGSKRRAKELGGEGDMDEQIYEEDFAD
DDEHAAMEEDDEEAKEAEERLKREYRAANKQRDAGVDEDEDDDTPGMSKQAKAMQKLIRS
REGNDAYESEEDKNPYASSEEEEEEEELPVHTGPAIQQQPQQVDVRAKSQTPKPGEGVKP
QTDANNSRASSPVGSPSLGGHSIVAKRATSPKAHKPLTQSISPSGSRATSPVSGAASPLN
GLKSLSNKRKADESSMNSAGPPKAKKRREVIPATREEMQTMLIEWLRTSPRDKATTRECI
HHFTPYLTDPEKKAEFSKLVREVATLKDGVLALRPSIASAAPSPAPLVQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaagcaagcttcaatggacctactcttccatccgaagaagaacaagaaatca
gcgctgcctccgccaccacgcaagaccccacctacaccacggcccaaacctgcgcttgag
aaggaagatgatggtgaactaaaactcccagactggccctaccaagaatttagactcctt
tcatctgctttaaatgggtggaattacgacgtgatgaagtttgactcgcgcaaaccgata
gatgtctcgaagtgggtaggacccgtgaagctgaatcggaaagacctgcgtagggatgag
ccggcatcagaaggtgctccaaaagctgtagggcctatggtaggccctgacggcaaacct
gttattggaacggatggtaaggtggtgatgattgatatggaggggaaaccgatacaccct
acggatgccacgtcctcaccaaaggacagagggaaaggtgccaataatgctgccaatgcg
aaaaaacggttccagaagaagacgaaacaggtcttttacgttccagaggaagtgaggcgg
ctgaggaaagaagagagatatccttgggttttagaagactcacaagcagacaataaggaa
ctttggattggacagcttgaggacgttggcaaagcagagacacatgcttttttcatgccc
gcggccaatgacgttttcaaatttgtgcctgcgcaccgctggtacaagtttcagaagaag
ctaaagcatgacctcccaacggacactgctggcgtcgagcaattatacacaacctcgcag
aaacgcgatcaccaggcatggttggctagtcgtaatggaggtaggggaccctcggcttcc
acggctgcaatgttcaaggcagaggctgagggaaggactattaccatcggcaattcgctt
gtacatgacgctgggcagagtttgggacccggtggcaggagactaagagctgtcgatagc
ggcgtcgatcgtctgttcggtgacgatgatgaggaggaaggaggttctaagagaagggca
aaggaacttggaggcgaaggcgatatggacgagcaaatttatgaggaagattttgctgac
gatgatgaacatgcggcgatggaagaggatgacgaggaagcaaaggaagctgaagaacgt
ctcaaacgagagtacagagcagcaaataaacagcgcgatgcaggtgttgatgaggatgaa
gatgatgacactccgggcatgagcaaacaagccaaggcaatgcaaaagcttatccgcagc
cgcgaaggaaacgatgcgtatgaaagtgaagaggacaagaacccttacgcaagttcggag
gaggaggaggaggaggaggaactgcccgttcacactggacctgcaatccaacaacaaccc
cagcaggtggacgtccgtgccaagtcgcaaacacccaaaccaggagaaggggtcaaaccc
caaacagacgctaacaactcgcgagcatcatctcctgttggatcaccgagcttgggtggt
cattctattgttgctaagcgagctactagccctaaagcacacaaaccgctcacgcagagc
attagccccagtggcagccgggcgaccagcccagtgtctggtgcagcttccccgctgaat
gggttgaaatctctcagcaacaaacgaaaagctgatgagtcgagcatgaattctgcgggg
ccgcccaaggccaagaaacggagagaagtaatacccgccacgcgagaggaaatgcagacg
atgttgattgaatggttgaggacgtctccgagagataaagctacgactagggagtgtatc
catcacttcacgccctacctcacagatccggaaaagaaggcagaattttcaaagctggtt
agggaggtcgcgacgctcaaagatggtgtccttgcgcttcgaccgagtattgcttctgcg
gctccctcacccgcgccactggtacagtga
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