Agaricus bisporus var. bisporus H97: AGABI2DRAFT220361
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Entry
AGABI2DRAFT220361 CDS
T03140
Symbol
AGABI2DRAFT_220361
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGABI2DRAFT220361 (AGABI2DRAFT_220361)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT220361 (AGABI2DRAFT_220361)
Enzymes [BR:
abv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AGABI2DRAFT220361 (AGABI2DRAFT_220361)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
AGABI2DRAFT220361 (AGABI2DRAFT_220361)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
18085047
NCBI-ProteinID:
XP_006460362
JGI:
Agabi_varbisH97_2_220361
LinkDB
All DBs
Position
Unknown
AA seq
1750 aa
AA seq
DB search
MNIAHSIPSTITSVSFSFLSTQDIRRISVKQIVNPVLLDDLNRPNIGGLYDPALGPSDRS
DICATCHLTYFTCPGHYGHIDLPAPVFHPLFMGNMYNLLRGCCMFCHRFKMSRTVLCQYV
AKFRLLERGLLEAAHCVDDLQIRERKKKSKTRSREDEDEGADTTMGTDVPDETPQQFMAR
INLYVAIHLSRAKGNTRDNYKDALVYQARKELVNDFLKNTILKKCQNGDCSSAGYTYRKE
GHTKIVEYDLSAKQKGSLMRKRPDVLLAEKTGNFMAIQQLRPSTDSDVEMDGSQAAESDE
DEDEDEDEDEEDAEAVDLGKGMFDTDAREGQLPRAVSGRVKTARGRNERVVAPEECRAHL
RRLFRNEAVVCSLIFGRHGPFAPLSFGDLSLASADMFFMDVIPVSPTRFRPPAKLGDTLF
EHPQNELLARVLTTSYRMRDVNVELRSLQEKKDAPVDEGQRKQLLASLLERLVQLQVDVN
SFIDSSKNPQPVRQGKLPPAGVKQGLEKKEGLFRKHMMGKRVNYAARSVISPDVNIEPNE
IGIPPVFARKLTFPEAVTPSNFHEMRQRVITGPHGYPGATMVEYEDGHQQSLDKLTVEQR
TAIANQLLTPQEGDRTVAGRKGLNTRTPAINKKVYRHLKDGDALILNRQPTLHKPSMMVH
KAKVLQGEKTIRMHYANCNSYNADFDGDEMNIHFPQNHVARAEAMMIANTDNQYLVPTSG
NPLRGLIQDHVVAGVWMTKQDSFFTREDYFQLIYGALRPEDEDYCTTGRLETLPPTIWKP
KPLWTGKQIISTILKNLTPPKFKGLNLDAKTKVPGFLWGKDSKEDKVVFMDGELLCGVLD
KAAFGASDYGLVHSVYELYGADVAGKLLGILSRLFTKFLQHRAFTCRMDDLILTPEGDRK
RVELLEKGRNWGTEAAIENFPSLKDTAPEEIPVALEALLLNVLRDDKKMAGLDMTVKTKL
SKLTSSVSDACLPHGLLRKFPHNNMQTMTQSGAKGSAVNARQISCGLGQQELEGRRVPVM
VSGKTLPSFRPFETKAIAGGYVASRFLTGIKPQEFYFHCMAGREGLIDTAVKTSRSGYLQ
RCLIKHLEGIHVHYDHTVRGSDNSIYQFAYGGDALDVTKQKHLYQFDFIAQNEESLVMRL
QPMRVADAVDDSTAISYMKKVLKRSTDRKRRGEPSKRDKYDPALTLYSPSRFLGATSEQF
AVAVDQYMKSNPNDLLTKKGDDEEALRRRHEKMLAYNFKMIMNVKYMRSLVEPGEAVGLL
ASQGVGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTASQKPKTPSMSMLIRESVSQ
AEIDLFCKRASRVALSQLVEDVVVREISKVEGGARRTVFSIDINFFPEEEYTSEYDLGPF
DLLNAFSIRFPMILKKEIANEMKKLDADLKSQIAELGKGKKSSTREGGDGDAEDEEEEGP
RKKRGGDDESEAGDGDADDEKRARQKKQQATYESDEDQSEDEGEEGEGEFDDAEIEAAYA
EDDDVDIDSDKKKRKKKKASSLDDEVSRVSEMFMKHLQHATSFTFNSSRCTLELEFTTDM
PKLLFVGIVERTCRATVIREIPGITECFQIKDDSKKGQEPEIKLTTNGSNFRGMWKFAVQ
SGESILRDDEIYSNDIYAILMTYGVEMARAAILREMGGVFGAYNIQVDRRHLELIADYMT
FEGGYKPFNRKGISANPSPLLKASYETTAAFLSDATLYGDFDDLSTPSGNIVIGRPNATG
TGVFDVVMPV
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcacattccataccttccactatcaccagcgtcagcttttcctttctctca
acgcaagatattcgacgtatttctgtgaaacaaattgtcaaccccgtacttcttgatgat
ctgaaccggccaaacatcggcggtctttatgatcctgctctaggaccaagcgatcgctct
gacatttgtgctacttgtcatcttacttatttcacctgtccaggacactatggacacatt
gaccttcccgctcctgtatttcacccgctatttatgggaaacatgtataacctcctccgg
ggatgttgtatgttttgccaccgatttaaaatgagcaggacggtgttatgccaatatgtt
gccaagtttagactattagaacgaggactgttagaggcagcgcactgtgttgatgacttg
caaatacgggagcgaaagaaaaagtcgaaaacaagaagcagagaggatgaggatgagggt
gcagatacaacaatgggcacagatgttcctgacgaaacaccccagcaattcatggcgcga
atcaatctctacgttgccatacacttatctcgggccaaaggcaacactcgtgataattat
aaagatgctctcgtttaccaggcccggaaggagttagttaatgacttcctcaaaaatacc
attcttaaaaaatgtcagaacggtgattgtagcagtgcagggtatacatatcgcaaagaa
ggccacaccaaaatcgtcgaatacgacctctcagcgaaacaaaaaggctctctcatgaga
aaacgccctgatgttctgttggctgagaagacgggaaactttatggctattcaacaattg
agaccatcgaccgattcagacgttgaaatggatggttctcaagcggcggaaagcgacgag
gacgaggacgaggacgaggacgaggatgaagaggatgcagaggcagttgacctgggaaag
ggtatgttcgacaccgatgctagggaagggcaattacctagggcggtgagtggtagggtg
aaaactgcgaggggtcgtaatgagcgagtcgtggcacctgaagaatgtcgtgcacactta
cgccgcctcttccgcaacgaagctgtcgtttgttctctcatatttggccgccacggacct
ttcgctcctttgtctttcggggaccttagccttgcttctgctgatatgttcttcatggac
gttatccccgtctcgccgactcgcttccgcccccctgccaagttgggtgacacgctgttc
gaacatccgcaaaatgaactgctagccagagttttgacgacttcgtaccgtatgagggat
gtcaacgtcgaactacgatcattgcaagaaaaaaaagatgcgcctgtcgacgaaggtcag
cggaagcagcttctggcctctctcctggagcggttggttcagctacaggtggacgtgaat
agcttcattgatagcagcaaaaatccacagcctgtacgacaaggcaaactccctcctgct
ggtgtcaagcagggattggagaaaaaagagggtttgttccgcaaacatatgatggggaaa
cgtgtcaactatgccgctcgatcagtcatctctccagacgtcaatatcgaacccaatgaa
atcggaataccacccgtgttcgctcgaaaacttacattccctgaggctgtcactccttcc
aacttccacgagatgcggcagagggttatcactggtccacatggatatcctggtgccacc
atggttgaatatgaggacggccaccagcaatcgttggacaaactcactgttgaacaacga
acagccatcgcaaatcaattgcttactcctcaagaaggtgatcggacggtggcgggaagg
aaaggtcttaatactcgaacacccgccataaacaagaaagtgtatcgacatctgaaagac
ggagatgccttaattctgaatcggcagccaacgttgcacaaacctagtatgatggtgcac
aaagcgaaagtacttcaaggagagaagaccatccgtatgcattatgccaactgtaactcc
tataacgctgatttcgatggtgacgaaatgaatattcattttcctcaaaaccatgtcgct
cgtgcggaagccatgatgattgccaataccgacaaccaatacctcgtacccacctccggc
aatccattacgtggtctaattcaagatcacgtcgttgccggagtgtggatgacaaaacaa
gattccttctttactcgggaagattatttccagctcatatatggagctttgagacctgaa
gatgaggattattgtacgactggcagactggaaacgctaccgccgacaatttggaaaccc
aaacctttatggacgggaaagcagattatctcgaccatccttaaaaatcttaccccacca
aaattcaaaggccttaatttggatgccaaaaccaaagttccaggcttcctttggggcaag
gattcaaaagaggacaaggtcgtgttcatggatggtgagcttttgtgtggtgttcttgac
aaagcagcctttggtgccagcgattacggcctcgttcactctgtatatgagctctacggg
gcagatgttgccgggaaacttctcggtattctgagtcgcttgttcactaaatttcttcaa
caccgagccttcacgtgtagaatggacgatttgatccttacacctgagggggatcgcaaa
cgtgttgaactcctggagaaggggcgaaactggggaacggaagctgctatcgaaaacttc
ccgtctctcaaggatacagcaccagaagaaatccccgtggcattggaggcacttctattg
aatgtcttgcgcgacgataaaaaaatggctggtcttgatatgactgtcaaaaccaaactt
tccaagctcacttcttcagtctcggatgcttgtctgccacatggactattgcgcaagttc
ccgcacaacaacatgcagactatgacacaatccggtgcgaaaggttctgcagtcaatgct
cgacagatatcctgtggtctgggtcagcaagaattggaaggccgccgtgtaccagtcatg
gtcagtggaaagacgcttccctctttcagacctttcgagacaaaggctattgctgggggc
tatgtcgcgagtcgattcttgactggtatcaaacctcaggagttttactttcactgtatg
gctggacgcgagggtctcattgatactgctgtgaagacttcccggtctggttatcttcaa
cgctgcctcatcaagcacctggagggcattcacgtgcactatgaccatactgttcgcgga
agtgataactctatatatcaattcgcgtatggtggagacgccttagacgtgacgaagcag
aaacatctgtatcaatttgatttcatagcgcagaacgaggagtcgctggtgatgcgctta
cagccaatgcgtgtagcagatgcagtagacgactcgacggcgatatcgtatatgaaaaaa
gtcctcaaaaggtcaacagatcggaaacgaagaggagagccgtcgaaaagggacaagtat
gatcctgcgttgacgttgtatagtccaagtagatttctgggtgcgacgtcggagcaattc
gcggtggcagtggatcagtacatgaagtcgaatcctaatgatctattgacgaagaaagga
gatgacgaggaagcactgcggaggagacatgagaagatgctagcgtacaactttaagatg
atcatgaacgtcaagtatatgcgaagcctggtcgaacctggcgaagctgtcgggttgttg
gcttctcagggtgtgggcgaaccctcaacacagatgactctcaataccttccattttgct
gggcacggtgcagctaatgtcaccctcggtattcctcgactacgtgagattgttatgact
gcatctcaaaaacccaagacgccttcaatgagcatgcttattcgtgagagcgtctcccag
gccgagattgacctcttctgcaagcgcgccagtcgggtcgctctatctcaacttgtcgaa
gatgtcgttgtacgcgaaatatccaaggtagagggaggtgcacgccgaacggtgttcagc
atcgatatcaacttctttcctgaggaagagtatacctcggagtatgatcttggaccgttt
gacctcttaaatgccttttcaatccgatttcctatgatactgaagaaagaaatagccaac
gagatgaagaagttggacgcagatctcaaaagtcaaattgcggaactagggaaggggaag
aaatcttctacaagagagggtggggacggagatgcggaagatgaagaggaggaagggccg
agaaagaaacgagggggtgacgatgagagtgaggctggcgacggtgatgcggacgatgaa
aagagagcgagacaaaagaaacaacaagccacgtatgagagtgacgaggatcaaagcgag
gatgagggtgaggagggcgagggagagtttgatgatgcagagattgaggctgcttacgct
gaagatgatgacgtggacattgacagtgataaaaagaagaggaagaagaaaaaggcatct
tcacttgacgatgaagtcagccgggtatcggaaatgttcatgaaacacttgcagcatgcg
acgtcgttcacttttaattcgtctcggtgtacgttggaacttgagttcaccactgatatg
ccaaagctgttatttgttggcattgttgaacgaacgtgtcgagcaactgtcatccgtgag
atcccagggattacagagtgtttccagatcaaagatgacagcaaaaaggggcaggagccc
gagatcaagcttacgactaacggatctaatttccgtggcatgtggaaattcgcggtacaa
tcgggagagagcatcttgcgggacgatgaaatttattcaaatgatatctatgcgatacta
atgacatatggggtggagatggcgcgagcggctattttacgggaaatgggaggcgttttt
ggagcgtataatatccaggtggacagacggcatcttgaattgatcgccgattatatgact
ttcgagggtggctacaagccgtttaatcggaagggcatttcggcgaatccatcacccctg
cttaaggcgtcatacgaaacgacggctgcattcctttccgatgcgacgctctacggagac
tttgacgacctctcgacgccgtctgggaacattgtcatcggacgaccgaatgccacggga
acgggggtgtttgacgtagtgatgcccgtgtaa
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integrated database retrieval system