Agaricus bisporus var. bisporus H97: AGABI2DRAFT226482
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Entry
AGABI2DRAFT226482 CDS
T03140
Symbol
AGABI2DRAFT_226482
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI2DRAFT226482 (AGABI2DRAFT_226482)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT226482 (AGABI2DRAFT_226482)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AGABI2DRAFT226482 (AGABI2DRAFT_226482)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
18085321
NCBI-ProteinID:
XP_006455151
JGI:
Agabi_varbisH97_2_226482
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MSIFGATNPAPTGGTNIFGTTQQPTTNPLFGNSQNQQAPSLFGNTNQFQQNQQQQPSGSL
FGNNNNPQQGQPTGSIFGNANSGGGLFGATSQQQQPAGGTGTGLFGGTAGTGTGLFGNMQ
SQQQQQPGAAPSLFGSTTTQPSAAGGGGGIFGNTQNQQQQQQQQQQQQQQQQQPTAGTSL
FGNTSTQPATSGGLFGSANTNQSSTGGGLFGSTNTNQPSTGGGLFGSTLNQPAAGGGLFG
NTSTSNAQPSTGLFGNSTATNQPSNVFGGSNTNNQQQSSLFGGNKPGGIFGSSTTGTGGG
LFGNTQNQNQNQQQQQQQQPSLFGSTTTGQPSTGLFGGSSTNAGGGLFGNRSQQPGTGSL
FGSTTGAGAGLNASTLPSSSLLGSRTALTPAQQQADAQTQALQLQQRIEAIYHAWNPSSP
QCRFQHYFYNLVSPERVGLYGRPTNALNDTLWEKARRENPDPTCHVPVLAIGFDDLRTRV
EAQNKKSTEHQQYLNELKSRLESLATQHTLSNSSRLLKAVLAQTQLTQRLLKFVQHLHLL
IPSVRSSSIRPEEEQLRSSLEELEEELRRGRMKGKLNELWAHLGAVNASKERARVGVGEW
AVVDEDGLAHLTQILADQQAGLSHLTKILQKVLKDVSIIMGTSSNTAQSDYEVDNLLSST
TDILRASALR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatttggagcaacaaatcccgcgccgacgggtggcacgaatatctttggcaca
actcaacaaccgacgacgaatcccctttttggtaattctcagaaccaacaagcaccttcg
cttttcggaaacacaaaccagtttcagcaaaatcaacagcaacagccttctggttccctc
tttggaaacaacaacaatccacagcagggccagccgaccggttccatttttgggaacgcc
aattcggggggaggtctttttggcgccacaagtcagcaacaacagccggcgggtggtacg
ggtacagggctgtttggtggtacagctgggacggggacaggtttattcggcaatatgcaa
tcccagcaacaacagcagccgggtgcggcgccaagtttgttcgggagtacgacaacacaa
ccgtccgcggcaggtggaggaggaggcatttttgggaatacacaaaaccaacagcaacaa
caacagcagcagcaacaacaacaacaacaacaacaacagccaacggctggtacttcgcta
tttggaaacacgtctacgcaacccgccacgagcgggggattgtttggtagcgcgaatacc
aaccaatcatcaaccggtggaggcctattcggtagtacaaatacaaaccaaccatcgacc
ggtggaggtctgtttggcagtacgttgaaccaacctgccgctggtggtggcctgttcgga
aacacttcaacctcaaacgctcagccttcgactggtctgtttgggaacagcaccgcgacg
aaccaaccctcgaatgtgtttggtggatctaatacgaacaaccaacaacaatcgtctttg
ttcggggggaataaaccgggtggaatatttggttcgtccaccaccggcaccggaggaggt
ttattcgggaatacccagaaccagaaccagaatcaacagcagcagcagcagcaacagcct
agcctcttcggtagtacgactacaggacaaccttccacgggtctgtttgggggttcttct
accaacgctggtggtggccttttcgggaatagatctcaacagcctggtactggttcgctc
ttcggaagcacgactggagctggggcaggattgaacgcgtctacgctaccctcaagcagt
ttattgggctcaagaaccgctttgacgccagctcagcagcaagccgatgctcaaactcag
gcgctccaacttcaacaaagaatagaggccatatatcatgcatggaacccgtcctcgcct
caatgtcgattccaacattacttttataacctcgtcagtccagaacgcgtcggtttgtac
ggtcgacccacaaacgctctcaatgataccctttgggaaaaagccagacgcgagaatcct
gatccaacctgtcacgttcctgttctagcaataggatttgacgacctccgcacccgagtc
gaagcccaaaacaaaaaatcaactgaacatcaacaatatctcaacgaactcaaaagccgt
ctcgaatctctcgccactcaacatacactatccaattcctctcgacttttgaaagctgta
ttggcgcaaacgcaattgacgcagaggttattgaagtttgtacaacatttgcatttattg
ataccgagtgtgaggagttcgtcgattagacctgaggaagagcagttgaggagttcgttg
gaggaacttgaggaggaattgaggaggggtaggatgaaagggaagttgaatgaattgtgg
gctcatcttggtgctgttaatgcgtcaaaggagcgtgcgagggttggagtgggagaatgg
gcggttgtggatgaggatggtttggcacacttgactcagattctagcagatcaacaagca
ggtttatcacacctaaccaagatcctgcaaaaagtattaaaagacgttagtatcatcatg
ggcaccagttcaaacaccgcacaatccgattacgaagtagataatcttctcagctccacc
acagatatacttcgtgcgagcgcgttgcgatga
DBGET
integrated database retrieval system