KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT226482
Entry
AGABI2DRAFT226482 CDS       T03140                                 
Symbol
AGABI2DRAFT_226482
Name
(RefSeq) hypothetical protein
  KO
K14308  nuclear pore complex protein Nup54
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AGABI2DRAFT226482 (AGABI2DRAFT_226482)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT226482 (AGABI2DRAFT_226482)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     AGABI2DRAFT226482 (AGABI2DRAFT_226482)
SSDB
Motif
Pfam: Nup54 Nucleoporin_FG COMPASS-Shg1
Other DBs
NCBI-GeneID: 18085321
NCBI-ProteinID: XP_006455151
JGI: Agabi_varbisH97_2_226482
LinkDB
Position
Unknown
AA seq 670 aa
MSIFGATNPAPTGGTNIFGTTQQPTTNPLFGNSQNQQAPSLFGNTNQFQQNQQQQPSGSL
FGNNNNPQQGQPTGSIFGNANSGGGLFGATSQQQQPAGGTGTGLFGGTAGTGTGLFGNMQ
SQQQQQPGAAPSLFGSTTTQPSAAGGGGGIFGNTQNQQQQQQQQQQQQQQQQQPTAGTSL
FGNTSTQPATSGGLFGSANTNQSSTGGGLFGSTNTNQPSTGGGLFGSTLNQPAAGGGLFG
NTSTSNAQPSTGLFGNSTATNQPSNVFGGSNTNNQQQSSLFGGNKPGGIFGSSTTGTGGG
LFGNTQNQNQNQQQQQQQQPSLFGSTTTGQPSTGLFGGSSTNAGGGLFGNRSQQPGTGSL
FGSTTGAGAGLNASTLPSSSLLGSRTALTPAQQQADAQTQALQLQQRIEAIYHAWNPSSP
QCRFQHYFYNLVSPERVGLYGRPTNALNDTLWEKARRENPDPTCHVPVLAIGFDDLRTRV
EAQNKKSTEHQQYLNELKSRLESLATQHTLSNSSRLLKAVLAQTQLTQRLLKFVQHLHLL
IPSVRSSSIRPEEEQLRSSLEELEEELRRGRMKGKLNELWAHLGAVNASKERARVGVGEW
AVVDEDGLAHLTQILADQQAGLSHLTKILQKVLKDVSIIMGTSSNTAQSDYEVDNLLSST
TDILRASALR
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtcgatatttggagcaacaaatcccgcgccgacgggtggcacgaatatctttggcaca
actcaacaaccgacgacgaatcccctttttggtaattctcagaaccaacaagcaccttcg
cttttcggaaacacaaaccagtttcagcaaaatcaacagcaacagccttctggttccctc
tttggaaacaacaacaatccacagcagggccagccgaccggttccatttttgggaacgcc
aattcggggggaggtctttttggcgccacaagtcagcaacaacagccggcgggtggtacg
ggtacagggctgtttggtggtacagctgggacggggacaggtttattcggcaatatgcaa
tcccagcaacaacagcagccgggtgcggcgccaagtttgttcgggagtacgacaacacaa
ccgtccgcggcaggtggaggaggaggcatttttgggaatacacaaaaccaacagcaacaa
caacagcagcagcaacaacaacaacaacaacaacaacagccaacggctggtacttcgcta
tttggaaacacgtctacgcaacccgccacgagcgggggattgtttggtagcgcgaatacc
aaccaatcatcaaccggtggaggcctattcggtagtacaaatacaaaccaaccatcgacc
ggtggaggtctgtttggcagtacgttgaaccaacctgccgctggtggtggcctgttcgga
aacacttcaacctcaaacgctcagccttcgactggtctgtttgggaacagcaccgcgacg
aaccaaccctcgaatgtgtttggtggatctaatacgaacaaccaacaacaatcgtctttg
ttcggggggaataaaccgggtggaatatttggttcgtccaccaccggcaccggaggaggt
ttattcgggaatacccagaaccagaaccagaatcaacagcagcagcagcagcaacagcct
agcctcttcggtagtacgactacaggacaaccttccacgggtctgtttgggggttcttct
accaacgctggtggtggccttttcgggaatagatctcaacagcctggtactggttcgctc
ttcggaagcacgactggagctggggcaggattgaacgcgtctacgctaccctcaagcagt
ttattgggctcaagaaccgctttgacgccagctcagcagcaagccgatgctcaaactcag
gcgctccaacttcaacaaagaatagaggccatatatcatgcatggaacccgtcctcgcct
caatgtcgattccaacattacttttataacctcgtcagtccagaacgcgtcggtttgtac
ggtcgacccacaaacgctctcaatgataccctttgggaaaaagccagacgcgagaatcct
gatccaacctgtcacgttcctgttctagcaataggatttgacgacctccgcacccgagtc
gaagcccaaaacaaaaaatcaactgaacatcaacaatatctcaacgaactcaaaagccgt
ctcgaatctctcgccactcaacatacactatccaattcctctcgacttttgaaagctgta
ttggcgcaaacgcaattgacgcagaggttattgaagtttgtacaacatttgcatttattg
ataccgagtgtgaggagttcgtcgattagacctgaggaagagcagttgaggagttcgttg
gaggaacttgaggaggaattgaggaggggtaggatgaaagggaagttgaatgaattgtgg
gctcatcttggtgctgttaatgcgtcaaaggagcgtgcgagggttggagtgggagaatgg
gcggttgtggatgaggatggtttggcacacttgactcagattctagcagatcaacaagca
ggtttatcacacctaaccaagatcctgcaaaaagtattaaaagacgttagtatcatcatg
ggcaccagttcaaacaccgcacaatccgattacgaagtagataatcttctcagctccacc
acagatatacttcgtgcgagcgcgttgcgatga

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