KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT62161
Entry
AGABI2DRAFT62161  CDS       T03140                                 
Symbol
AGABI2DRAFT_62161
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AGABI2DRAFT62161 (AGABI2DRAFT_62161)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abv03021]
    AGABI2DRAFT62161 (AGABI2DRAFT_62161)
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT62161 (AGABI2DRAFT_62161)
Transcription machinery [BR:abv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     AGABI2DRAFT62161 (AGABI2DRAFT_62161)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     AGABI2DRAFT62161 (AGABI2DRAFT_62161)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCHC F-box_5 zf-CCCH_4 zf-CCHC_3 zf-CCHC_2 zf-CCCH_9
Other DBs
NCBI-GeneID: 18085928
NCBI-ProteinID: XP_006454417
JGI: Agabi_varbisH97_2_62161
LinkDB
Position
Unknown
AA seq 290 aa
MTTANPLAGPSVLKDIVNPQFHQNSFPAESYIKVDLGIKLDKDDQICRLFLTPAGCPLGP
LHCPLRHTSPSAQNFQPPKPLPTHPRDRERVSTVCKHWLRGLCKKGDACEFLHEYNLRRM
PECYWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPICPRKHVRKVACQLYLTG
FCPMGPECPRGHPKPNLPLASAYEPAPALSNRELGPPPPGFARYADLDRVPGNLAVGPNG
PLQMPQRRDPNEVTCFKCGEKGHYANHCRNRNVPGNRGGTERVRRYVGDE
NT seq 873 nt   +upstreamnt  +downstreamnt
atgaccactgcaaaccctcttgccggcccatctgtcctcaaagacatagtcaatccacaa
tttcatcaaaattcatttcctgcagagtcctacatcaaggttgaccttggcataaaatta
gacaaagatgaccagatctgtaggctttttctaacacctgccggctgtccacttggtccg
cttcattgtccattgcgtcatacctcgccttctgcacagaactttcagcctccaaagcca
ctgccgacgcatccacgcgacagagagcgtgtctctacggtgtgtaaacactggctacgt
ggtctctgcaaaaaaggagatgcctgtgaatttctccacgagtataaccttaggcgcatg
cctgaatgttactggttcgcgaaatacggctattgctctgcgggtgatgagtgtctttac
gctcatccaaaggaacgtaagattgagtgtccagactataaccgcggcttttgtaaacta
ggccccatttgcccccgaaagcacgtacgaaaagtggcatgtcaactctatttgactgga
ttttgtcccatgggaccagaatgtccacgcggccatccgaagcccaatcttccgttggca
agtgcttacgagcctgcccccgctctctccaaccgcgaacttggtcctcctccgccaggt
tttgctagatatgcagacctagatcgtgttcctggtaatctggctgtggggcccaatggt
cctcttcagatgccccaaagaagagatccgaacgaagtgacatgcttcaagtgcggcgaa
aaggggcactatgccaatcattgtcgcaatagaaatgttcctgggaatcggggtggcact
gaaagagttcgccgatatgtgggtgatgaatga

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