Agaricus bisporus var. bisporus H97: AGABI2DRAFT63232
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Entry
AGABI2DRAFT63232 CDS
T03140
Symbol
AGABI2DRAFT_63232
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI2DRAFT63232 (AGABI2DRAFT_63232)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT63232 (AGABI2DRAFT_63232)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AGABI2DRAFT63232 (AGABI2DRAFT_63232)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18085974
NCBI-ProteinID:
XP_006458097
JGI:
Agabi_varbisH97_2_63232
LinkDB
All DBs
Position
Unknown
AA seq
261 aa
AA seq
DB search
MALSNFDRRRVNGPEDSFAPVYAPQNDQNERDPFQRRKRGPLDVRPIFLQPGLITQANGS
AYIETEHTKIACAVYGPRQSKNVSYSESGHLNVEVKFAPFSCRRRRAPLRDAEDRTIAIA
VHQAIVSSVRLELLPKSTIDVFVTVIEADGIEGVIASASIAVSTALADAGIEILGLVVSC
SASLIGGGIWLDPSEDEISCSEGTIIVSCIPALGTVTSIWQGGQIPLKSVVDAMEKCQSR
CTDIHKIVAQALRGYSSHNPT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggccctctcaaattttgaccgacggcgagtgaatggacccgaagacagttttgcacca
gtgtatgcccctcaaaatgatcagaatgaacgggatccatttcaacggaggaagagaggt
ccactggacgttcgaccaatttttttgcagcctggcttgatcacccaagctaatggatcc
gcctacatcgaaactgaacatacgaagatagcttgtgccgtctatggaccccgacagtcg
aaaaacgtgtcgtatagcgagagtggacatctcaatgttgaagtaaaatttgcccccttt
tcttgccggcgtcgacgagcgccgttacgggatgccgaagatcgaacaattgcaatagca
gttcaccaagctatcgtttcttctgtcagactcgagctgctacccaaatcaacaatcgat
gttttcgtcacagtaattgaagccgatgggattgagggtgtcatcgcctcggcctccatc
gctgtgagcaccgcgctagcagatgccgggattgaaatacttggattggttgtatcgtgc
tctgcttccctaatcggcggtggaatttggctcgacccaagcgaagatgagataagttgt
tcagagggtacaatcatcgtatcctgcatcccagccctaggaaccgtgacaagcatctgg
caaggcggccaaatccctctcaaaagtgttgtcgacgctatggagaaatgtcaaagccgt
tgcacagatatacataagatcgtagctcaggcgctccgtggatactctagccacaatcct
acctag
DBGET
integrated database retrieval system
