Agaricus bisporus var. bisporus H97: AGABI2DRAFT65527
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Entry
AGABI2DRAFT65527 CDS
T03140
Symbol
AGABI2DRAFT_65527
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AGABI2DRAFT65527 (AGABI2DRAFT_65527)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT65527 (AGABI2DRAFT_65527)
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT65527 (AGABI2DRAFT_65527)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AGABI2DRAFT65527 (AGABI2DRAFT_65527)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
AGABI2DRAFT65527 (AGABI2DRAFT_65527)
COMPASS/SET1 complex (yeast)
AGABI2DRAFT65527 (AGABI2DRAFT_65527)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
18086085
NCBI-ProteinID:
XP_006459302
JGI:
Agabi_varbisH97_2_65527
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MSASMDKTVRLWDLRSPSCRGVLALPAPPIIAYDASGLVFAVAVNHYSRILLYDQANFDK
APFLTIILEDPTLSMISYPPRPIYITSLAFSSNTKYLLVGCSGDAHYILDAFEGHLLAKL
EGHVGLERRSTTSPPSIEPAKGSSGEEVGWTPDSKYVIGGSLDGRILIWDAQNLPQRMGP
VDLKAHPLRLRPLVVLEGHPGPSRCVKFNPRYNMMVTAGSELAFWLPDYSVDADEVARDL
LRKKGVL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtcgatggacaagacagttcggttgtgggatttacggtcaccttcctgtcgg
ggagttttagcgctccccgccccgcctataattgcatacgatgcatctggactagtgttc
gctgtcgctgtgaaccattactcgcggattctcctctacgaccaagcgaattttgataaa
gctcccttcctaaccatcatcctcgaagatccgacactgtcgatgattagttatccccca
aggcccatctacatcacatccctcgctttctcttccaatacgaaatatctacttgttggg
tgttcgggtgatgctcattatattctggacgcgttcgaagggcatttattggctaaattg
gaagggcacgttggtctggaacgaagaagcacaacttctcccccaagtatagaacctgcg
aagggaagtagtggtgaagaagtgggttggactcctgatagcaaatatgtgattggcggt
agtttggatgggaggattttgatctgggatgcgcagaatctacctcagcgaatgggacct
gtggatctgaaggctcatccgcttagattgcgtcctttagtcgtgttggaaggtcatcct
gggccttctagatgcgtaaagtttaacccgaggtacaatatgatggtcactgctggttcg
gaactggcattttggttaccagattatagcgtcgacgcagatgaggtagctcgggatctg
ctacgaaagaagggggtgttgtga
DBGET
integrated database retrieval system