KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT65527
Entry
AGABI2DRAFT65527  CDS       T03140                                 
Symbol
AGABI2DRAFT_65527
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AGABI2DRAFT65527 (AGABI2DRAFT_65527)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT65527 (AGABI2DRAFT_65527)
   03036 Chromosome and associated proteins [BR:abv03036]
    AGABI2DRAFT65527 (AGABI2DRAFT_65527)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     AGABI2DRAFT65527 (AGABI2DRAFT_65527)
Chromosome and associated proteins [BR:abv03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     AGABI2DRAFT65527 (AGABI2DRAFT_65527)
    COMPASS/SET1 complex (yeast)
     AGABI2DRAFT65527 (AGABI2DRAFT_65527)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 18086085
NCBI-ProteinID: XP_006459302
JGI: Agabi_varbisH97_2_65527
LinkDB
Position
Unknown
AA seq 247 aa
MSASMDKTVRLWDLRSPSCRGVLALPAPPIIAYDASGLVFAVAVNHYSRILLYDQANFDK
APFLTIILEDPTLSMISYPPRPIYITSLAFSSNTKYLLVGCSGDAHYILDAFEGHLLAKL
EGHVGLERRSTTSPPSIEPAKGSSGEEVGWTPDSKYVIGGSLDGRILIWDAQNLPQRMGP
VDLKAHPLRLRPLVVLEGHPGPSRCVKFNPRYNMMVTAGSELAFWLPDYSVDADEVARDL
LRKKGVL
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtcggcgtcgatggacaagacagttcggttgtgggatttacggtcaccttcctgtcgg
ggagttttagcgctccccgccccgcctataattgcatacgatgcatctggactagtgttc
gctgtcgctgtgaaccattactcgcggattctcctctacgaccaagcgaattttgataaa
gctcccttcctaaccatcatcctcgaagatccgacactgtcgatgattagttatccccca
aggcccatctacatcacatccctcgctttctcttccaatacgaaatatctacttgttggg
tgttcgggtgatgctcattatattctggacgcgttcgaagggcatttattggctaaattg
gaagggcacgttggtctggaacgaagaagcacaacttctcccccaagtatagaacctgcg
aagggaagtagtggtgaagaagtgggttggactcctgatagcaaatatgtgattggcggt
agtttggatgggaggattttgatctgggatgcgcagaatctacctcagcgaatgggacct
gtggatctgaaggctcatccgcttagattgcgtcctttagtcgtgttggaaggtcatcct
gggccttctagatgcgtaaagtttaacccgaggtacaatatgatggtcactgctggttcg
gaactggcattttggttaccagattatagcgtcgacgcagatgaggtagctcgggatctg
ctacgaaagaagggggtgttgtga

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