Agaricus bisporus var. bisporus H97: AGABI2DRAFT70511
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Entry
AGABI2DRAFT70511 CDS
T03140
Symbol
AGABI2DRAFT_70511
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
abv
Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT70511 (AGABI2DRAFT_70511)
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT70511 (AGABI2DRAFT_70511)
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT70511 (AGABI2DRAFT_70511)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI2DRAFT70511 (AGABI2DRAFT_70511)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AGABI2DRAFT70511 (AGABI2DRAFT_70511)
mRNA cycle factors
Common to processing body (P body) and stress granule
AGABI2DRAFT70511 (AGABI2DRAFT_70511)
Spliceosome [BR:
abv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AGABI2DRAFT70511 (AGABI2DRAFT_70511)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AGABI2DRAFT70511 (AGABI2DRAFT_70511)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
18086327
NCBI-ProteinID:
XP_006462145
JGI:
Agabi_varbisH97_2_70511
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MTNGLVNGNQSLESKFGSLGLGKSAYVPPHLRAQRAASSPVVSNGCVTGWNDSRPTTPSN
APRGGSAFDSRTPAPRSGFASRDTNRGGGWSGPNVNSSSSPRDPSGPSFGYGVWKDGQHV
VGGRNTRLEKELFGDATDTSKQHTGINFEKYDDIPVEATGADVPEPVLSFTSPPLDAVLL
ENIKYAMYTTPTPVQKYSIPIVARGRDLMACAQTGSGKTGGFLFPILSASFQLGPSPPPP
DTGNHFSRNRKAYPTALILAPTRELVSQIHDEARKFAYRSWVRPAVVYGGADINQQLRLI
ERGCDLLSATPGRLVDLIERGRISLSNIKYLVLDEADRMLDMGFEPQIRRIVQGEDMPDV
HERQTLMFSATFPRDIQILAKDFLKDYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLD
ILASQPKADLGLSLIFVETKRMADMLSDFLMGNNLPATSIHGDRSQRERETALQTFRTGR
TPILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVSTAFFNRNNKN
IVRDLVELLREANQEIPGWLETVAHEATFGGGGSRGGRGRGGRGGRGTTGRDYRAGGGGG
YGGGGGGGGGFGGGFSSGGGGGGGPARYGPPSGGGGGGYGGYGGSHGGNSGGGGWW
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatggtcttgtaaacggaaaccagagcctcgagagcaaatttggttctcttggc
ctcggcaagtctgcctatgttccccctcatcttcgggcgcagcgagctgcctcgtctcct
gtagtttctaatgggtgtgtaaccggctggaacgattctcgcccgactaccccctccaac
gcaccccgcggtggctccgcctttgactccagaactcctgcacctagaagcggtttcgcc
tctcgtgataccaatcgcggaggtggctggtccggtcctaatgtcaactctagctcctca
cctcgggatccgtctggcccatccttcggttatggtgtctggaaggatggccaacacgtc
gtgggtgggcgcaatacgcgcctggaaaaggagctttttggtgacgctaccgatacctcc
aaacaacacaccggcattaatttcgagaaatacgatgatatccctgtcgaggctactggc
gcggatgtaccagagcctgtcctctctttcacctctcccccccttgacgctgtcctgttg
gaaaatatcaagtatgccatgtacactactcctacccccgttcaaaagtactccattcct
attgtggcgagaggaagagatttgatggcttgtgcccagactggttctggcaaaaccgga
gggttcttgtttccaattctttctgcctctttccagctgggtccttccccacccccacca
gacactggtaatcacttcagccgcaaccgaaaggcttatccgacggctcttattttggct
cctacacgtgaactcgtttcgcaaattcatgacgaagcccgaaagttcgcgtatcgctcc
tgggttcgacctgccgtcgtctacggaggtgctgacattaaccaacaattgcgtctaatt
gagcgcgggtgtgacctcctgagtgccactcccggtcgtctcgttgatctcatcgagcgc
gggcgcatcagcttgtcaaacatcaaatacttggtgttggatgaggctgaccgcatgttg
gacatgggtttcgaaccccagattcgacgcatcgttcaaggcgaagacatgcctgacgtt
cacgaacgtcaaactctcatgttcagtgccaccttccctcgtgacattcaaattctagcc
aaagacttcttgaaggactatatcttcctgtctgtcggccgagtcggtagcacgtccgag
aacatcacgcaaaaaatcgagtacgttgaagacgccgataaacgcagcgtccttctcgat
atactcgcttcccaacccaaggcggatctcggtctctccctcatctttgtggagaccaag
cgcatggctgatatgctgagtgacttcttgatgggtaacaaccttcccgctacgtctatc
cacggtgatcgtagccagcgcgagcgtgagacggcactccagaccttccgcacagggagg
acgcccatcttggtcgcaactgctgtcgccgcgcgtggtttggatattcccaacgttacc
cacgtcatcaactacgatcttccctctgatatcgatgactacgttcatcgtatcggtcgt
accggccgtgctggaaacactggtgtcagtaccgccttctttaataggaacaacaaaaac
atcgttcgtgatcttgttgagcttcttcgtgaggccaatcaggagattccgggctggcta
gaaactgttgctcatgaagcaacctttggcggtggcggatcccgtggcggacgcgggcgc
ggaggcagaggcggcaggggcaccacaggtagggattaccgtgccggtggtggcggcggc
tatggtggtggtggaggtggaggtggcggattcggtggaggcttcagcagtggtggaggt
ggaggtggcggtcccgcacgatacggtcctcctagtggtggtggtggcggtggttacggc
ggatacggtggaagtcatggcggcaactcgggcggtgggggatggtggtag
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integrated database retrieval system
