Agaricus bisporus var. bisporus H97: AGABI2DRAFT71386
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Entry
AGABI2DRAFT71386 CDS
T03140
Symbol
AGABI2DRAFT_71386
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI2DRAFT71386 (AGABI2DRAFT_71386)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT71386 (AGABI2DRAFT_71386)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AGABI2DRAFT71386 (AGABI2DRAFT_71386)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
18086371
NCBI-ProteinID:
XP_006462088
JGI:
Agabi_varbisH97_2_71386
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MGPYVHISQLAPSAAGSVASSVTGPQDDEKIYALVIELMDSETRDTALLELSKKREQYDD
LALVLWHSFGIMPALLQEIVSVYPLLSPPNLTANVSNRVCNALALLQCVASHSETRQLFL
NAHIPLFLYPFLNTTSKTRPFEYLRLTSLGVIGALVKQNDNNTVIHFLLSTEIIPLCLRI
METGSELSKTVAIFIVQKILLDETGLTYICHTYERFYAVGTVLSNMVNQLVETQAVRLLK
HVVRCYLRLSDNVRAREALRACLPEPLRDNTFSALLKGDLVTKRCLTTLLNNLNEP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgtacgtccacatctcccagctcgcaccctcggctgcgggctctgttgcaagc
tccgtcactggcccccaggacgacgaaaagatatacgccctcgtcattgagctcatggac
tcggagacccgcgacactgccctgcttgagctcagtaagaaaagagaacagtacgatgat
ctcgccctggtcctctggcactcctttggcatcatgcccgcgttgctgcaggaaatcgtc
tccgtctatcccctcctctccccacccaatctgaccgcaaacgtgtccaaccgcgtttgc
aatgcccttgccctactccaatgtgtcgcttctcattctgaaactaggcagttgtttctc
aacgcccatataccactttttctatatcctttcctcaatactacttccaaaactcgtccc
tttgaatatttacgtcttacctcgctcggagtcatcggtgcccttgtcaagcaaaacgac
aacaacacggtgatccatttcctgctttcgacagagatcatccctctttgcctccggatc
atggaaaccggctccgaactctcgaagactgtcgccattttcattgtacagaagatcctc
ctcgatgagacgggtttgacgtacatctgccatacctatgagcgcttctacgccgtcggc
actgttttaagcaatatggtgaatcaactggtcgagactcaggcagtcaggctgctcaaa
cacgttgtccggtgctatttgcgcttaagcgacaatgttcgtgcccgcgaagcccttcgg
gcatgccttccggaacccttgagagacaacacctttagcgcgttgctcaagggtgatctt
gtgacaaaaaggtgtttaacgacactgctgaataatctgaatgaaccctag
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