KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT71819
Entry
AGABI2DRAFT71819  CDS       T03140                                 
Symbol
AGABI2DRAFT_71819
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03030  DNA replication
abv03410  Base excision repair
abv03420  Nucleotide excision repair
abv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
   03410 Base excision repair
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
   03420 Nucleotide excision repair
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
   03430 Mismatch repair
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abv03032]
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
   03036 Chromosome and associated proteins [BR:abv03036]
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
   03400 DNA repair and recombination proteins [BR:abv03400]
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
DNA replication proteins [BR:abv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
  DNA Replication Termination Factors
   ELG1-RFC complex
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
Chromosome and associated proteins [BR:abv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
DNA repair and recombination proteins [BR:abv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     AGABI2DRAFT71819 (AGABI2DRAFT_71819)
  Check point factors
   HRAD17(Rad24)-RFC complex
    AGABI2DRAFT71819 (AGABI2DRAFT_71819)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 AAA_11 AAA_30 DUF815 ResIII AAA_24 AAA_22 AAA_16 RuvB_N DEAD AAA_assoc_2 RCF1-5-like_lid AAA_19 AAA_5 AAA_3 AAA_7 ATPase_2 Viral_helicase1 bpMoxR Mg_chelatase nSTAND3 AAA_28 Fe-S_biosyn DNA_pol3_delta PIF1 MCM T2SSE SLFN-g3_helicase AAA_33 RNA_helicase
Other DBs
NCBI-GeneID: 18086389
NCBI-ProteinID: XP_006461859
JGI: Agabi_varbisH97_2_71819
LinkDB
Position
Unknown
AA seq 344 aa
MSDTLPTFSNGKGKEVDTGNADAESLPWVEKYRPVTLDDVVSHKDITSTIERFIERNRLP
HLLFYGPPGTGKTSTILAVARRIYGNSYKKQILELNASDDRGIDVVREQIKQFAETRTLF
SKGFKLIILDEADMMTQAAQAALRRVIEQFTKNVRFCIICNYVNKITPAIQSRCTRFRFS
PLPMTEVEKRVDMVVEAENVPLTTEGKNALLKLSKGDMRRALNVLQACHAAYDIIGESEI
YTCTGNPHPSDIEIIVNSMLSDEFTASYQMISKMKTERGLALQDLLTGAFDYIDTIELKP
HARIYLLDHLASTEHRLSTGGSEKIQLTALLGAFKTAVELSTKG
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtctgacaccttgcctacattttcgaacggcaagggtaaggaagtcgacacggggaat
gctgacgctgaatctttgccatgggtggagaaatacagaccggtgacactggacgacgtc
gtttcgcacaaggatattacgagcacgattgaaagattcattgagaggaaccggttacct
catcttctattctacggtcccccaggaactgggaaaacgtctactatactcgcagtagca
aggcgaatatatggcaacagttataaaaagcagatactcgaactcaatgcttccgacgat
cgtggaatagatgttgttcgtgaacaaatcaaacagtttgctgaaaccaggaccctcttc
tccaagggattcaagctcattattctggatgaagcagatatgatgacacaggcagcccag
gcagctcttcgacgagtgatcgaacagttcacgaaaaatgtccgcttttgcattatatgc
aattatgtcaataagattacaccggctatccaaagccgttgtacgaggtttagattttca
cctctgccgatgacagaagtcgagaagcgagtggatatggtcgttgaagccgaaaatgtc
cctctgactactgaagggaagaatgccttgctgaaactttccaagggagacatgcgaagg
gctctcaacgtcctccaagcttgccatgctgcatatgacatcataggggaaagcgaaatt
tacacttgcactggcaatcctcacccgtcggacatagagatcatcgtcaattcaatgtta
tcggatgagtttacagcttcttaccagatgatttcaaagatgaagacggaacgtggatta
gcactccaggatttattgactggtgcttttgactatattgatactatcgagctcaaacca
catgcaagaatatatctacttgatcatctcgcttcgacagagcaccgtttatcgaccggt
ggaagtgaaaaaatacaactcactgcccttctgggcgctttcaagactgcggtggagtta
tccacgaaaggatga

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