Acinetobacter baumannii 1656-2: ABK1_1114
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Entry
ABK1_1114 CDS
T01819
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
abx
Acinetobacter baumannii 1656-2
Pathway
abx03030
DNA replication
abx03430
Mismatch repair
abx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABK1_1114
03430 Mismatch repair
ABK1_1114
03440 Homologous recombination
ABK1_1114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abx03032
]
ABK1_1114
03400 DNA repair and recombination proteins [BR:
abx03400
]
ABK1_1114
Enzymes [BR:
abx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABK1_1114
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
ABK1_1114
DNA replication proteins [BR:
abx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABK1_1114
RNase H
ABK1_1114
DNA repair and recombination proteins [BR:
abx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABK1_1114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RVT_3
LPD1
Motif
Other DBs
NCBI-ProteinID:
ADX02748
LinkDB
All DBs
Position
complement(1206247..1207626)
Genome browser
AA seq
459 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGISFCP
PDAQLIVWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA
GHAGNEMADQLANLGADKTAQELKQPQSATVSQDIKKPEQDWLLDDPFGFDLVETTEDET
VTLEQTQEVEMIVVDEEMNVVEAVEQEEQQQNTNIHPQIVMTEAKLKLQGPRQLILDTET
TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSVQVHGITDEFLVDKPKYA
EIADTLFEYLKGAEIIAHNATFDMNFLDMEFKRVGLPALSEVCEVTDTLALAKNKHPGQK
NSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSESDQQKTTK
ARVQIELPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatccgggtttaggc
ggttggggtgcatatgtcattaccgaacagggtgaacataaattatttggcggtgaaccc
gacacaacaaataaccgtatggaacttactgcggctattgaaggaatctctttttgccct
cctgatgctcaattaattgtctggacagactcaaattatgtgaagcaaggtattacagaa
tggattcatggttggaaaaagaaaaactggaaagatgttaaaaatcctgacctatggcaa
aaactcgatgccgtttgtgcgggtagaaatattgaatggaactggattaaaggccatgca
ggacatgcaggtaatgaaatggctgaccaacttgcgaatttaggtgcagacaaaactgct
caagaacttaagcaaccacagtcagccactgtatcgcaagatataaaaaagcctgaacaa
gactggttactagacgatcctttcggattcgatctggttgaaacaaccgaagatgaaacg
gtcactttagagcagacacaagaagttgagatgattgttgtggatgaagaaatgaatgta
gttgaggctgtagaacaagaagaacaacagcaaaataccaatattcatccacaaattgtg
atgactgaagccaagcttaaattacaaggcccaagacaactcatactcgatacggaaaca
actggtttctatttccaagatggtgaccgcattattgaagtcggtgccatcgaaatgatt
aaccgtaagcttacgggtagttcgattcacatttatattaatcctgaaaaaccagtgggt
gactctgttcaagtccacggtattactgatgagtttttggtcgacaaaccaaaatatgca
gaaattgcagataccttatttgaatacctaaaaggcgcagaaattattgcccataacgca
accttcgatatgaacttcttagatatggagtttaagcgtgttgggttacctgctctttca
gaagtttgtgaagttaccgatactttagctttagcgaaaaataagcatcctgggcagaaa
aactcacttgatgccttagttagacgttatgaaattccagcgcgtgaccgtactttccac
ggcgcattactcgatgctgaaattctttctgatgtttacttggcaatgacaggtggtcaa
gtttcctttgatatggatgccctatcgcaaagtgaaagtgaccagcaaaaaacgaccaaa
gctagagttcaaattgaattacctgttatttacccttcagatgaagagctaaacatacat
gagacttgggtcaaagaatttgagaaaaaacatggagaaccttgcctttttgcaaaataa
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