Acinetobacter baumannii 1656-2: ABK1_1639
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Entry
ABK1_1639 CDS
T01819
Name
(GenBank) hrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
abx
Acinetobacter baumannii 1656-2
Brite
KEGG Orthology (KO) [BR:
abx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abx03019
]
ABK1_1639
Enzymes [BR:
abx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ABK1_1639
Messenger RNA biogenesis [BR:
abx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ABK1_1639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
NACHT
PhoH
AAA_30
TsaE
SLFN-g3_helicase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADX03273
LinkDB
All DBs
Position
1737469..1741350
Genome browser
AA seq
1293 aa
AA seq
DB search
MNFQENLSVLNGLNIDQWVMARDRYRLNRLRKDKKANTAEIEKLFEQSNAKVRQRFERLP
KIKLNQDLPVTQYADRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQ
PRRLAARSVSQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLS
KYDTIIIDEAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEV
EGRSYPVEVRYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADI
LIFSSTEQEIRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAE
TALTVPNIRYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLY
SEEDFLSRPEFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIEL
GALNEKKNELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPAD
KQMQADQKHALFKEADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWK
QTHQQLVELAEGLKLSFNEKPANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVF
PASTLHKTNTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGI
VNAYAQISLFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEE
VERVEDKLRRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDAL
WLNDRPTTQQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPG
WRLDLIEALLKALPKDKRRNLVPIPDTARKLMQGIDAVHLRQHIFSYLAFALRGEQITEK
DFSFERIDPYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVKQQKGEFKTFPENF
TFEASQKVTGVVVKQYQALVPTKNFAELEAKDESGVVIQTFNDQAEAIKQHREGIIRLVH
MQLGDLVRQLKKQISKPLALAYSPLGDKAKLEQMLVYATLQMAITTLPINADEFNQLLEQ
VKKQFLSYGQQALEQLSDIYIQWQQIRRQLLVLDPDVFGRSIDDIEDQLDLMSLGNFVYC
QPVDLWQEYPRYLKALLLRLDRLPNNLQRDHAAIDDVDPWMDKVFKFKNDPRIKELYLML
EELRISLFSQPMKTKMPISPTRLQKLWDRLGIS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttcaggaaaacttatctgtgctgaatggtttaaatatagatcaatgggtgatg
gcgagagatcgttaccgtttaaatcgtttacgtaaagataaaaaagccaatactgcagag
attgaaaaattatttgaacagtctaatgcaaaagttagacagcgttttgaacgcttacca
aaaatcaaattaaatcaggatcttcctgtaacccaatatgctgaccgtttaatagaagcg
attcaaaagcatcaggtcattattgtggctggtgaaacaggttcagggaaaactactcag
ctccctcaaattgcaatgttagcagggcgtggcttgactggtatgattggtcatacccag
ccacgtcgtttagctgcacgtagtgtgtcgcagcgtattgcagaagaagtcggcgaaaag
ctcggcgagtcaattggttttaaaatccgttttaatgaacaaggctcgcaagattcgatt
gtccggttaatgaccgacggtattttgcttgccgagttaggaaatgaccgcttcttgtct
aaatatgacaccatcattattgatgaagcgcatgagcgctcactcaatatcgattttatt
atgggttatttaaagcagttactgccaaaacgcccagatttaaaagtcatcgtgacttcg
gcaactttagatgtaaatcgttttagtaactactttaataatgcaccaatttttgaagta
gaagggcgtagttatccggttgaagtgcgttatcgcccaatttcagaaatgaatattggt
ggtagtgatgacgacgagttcgatgactttgaagaaaacctgccgcgtgcagtcgtacaa
gctgtagaggaatgctttgctgatgccgaagaaaaaggccatccagaacatgcagatatt
ctgattttctcaagtacagagcaagaaattcgagaattgcaggaaaccttacaaaagtac
gggccgagacataccgaaattttacctttgtatgcacgcttagccgtttctgagcaacaa
aagatttttagcccaagtggaaagggccgccgtattattattgcgacgaacgttgcagaa
actgcactgactgttcctaatattcgctacgtgattgatagcggctttgcacgtatatct
cgttataactaccgttcacgcgtgcaacgcttaccgattgaggcaatttcacaagctgca
gcaaatcaacgtaaagggcgttgtggtcgtgttgctccaggtgtgtgtattcgtttatat
agcgaagaagactttttaagtcgtcctgagtttaccgaacctgaaattaagcgaaccaat
ttggcatcggttattctgcaaatgcagagcttaggtttaggtgagctggaaaactttgat
ttcattgagccgccagatttccgtctagtcaatgatggtcgtaagttgctcattgagtta
ggcgcgctgaacgagaagaaaaacgaactgaccaaagtcggccaaatgatggcacgtatg
ccgattgatccaagactcgcacgtatgattgtgggtggtgctcattttggtgtactcaaa
gaaattttggtggtggtgagtgcactcgcagttcaagacccgcgtgaacgtccagcagat
aaacaaatgcaagctgatcaaaagcatgcactattcaaagaggcagattcagattttctg
ttttatttaaaactttgggatactttaaatcctaaaggcgaagcaggaatgtcggaaaac
aagcgccgtcaatttgctaagcagcatttcttaagttggttacggttacgtgaatggaaa
cagacacaccagcagttagttgagctggccgaaggtttaaaacttagttttaatgaaaag
cctgcaaattatgaaaacttgcaccgtgcgttgctgaccggtttattatcgttcattgcc
aataaaactgatgaacgtaatacctttatggcggtgcgtcagcaaaaggctaaagttttt
ccggccagtactttgcataaaaccaatactgcgtgggtgatggcttttgagatggtggaa
acctctcaagtctatttacgtacattagcaaaaattgatcctgaatggattttgcttgct
gcacgcgacttattgaaatatcactatttcgaaccgcattggtctaaaaaagccggtatt
gtaaatgcttatgcacaaatttcattgtttggtttaattattgaaccgaagcgtttggtt
aattttgaaaaagttgatcaacctgctgcacatgagattttcttacgtgatgcattaacc
acaggaaatctgggtacagttccaccatttttaaaacacaacttgcttaaacttgaagaa
gtagagcgagttgaagataaattacgtcgccgcgatttggtggtcgatgaagaaacgatt
tatcagttctatgcgtcgaaaattcctgaagaaattgcgagtcgtcgtagttttgaagac
tggcgtgcaaccgtagaagcaaaaaatccgcgttatttatacgtggaagatgatgcgctt
tggctcaatgaccgtccgaccacgcagcaattccctgatcatttacataatggtcagtta
cgcttggcaactacttatcgctttgacccaagtcatgatgaagatggcgcaacggtccaa
attccggtacaggcattgcctcaggtagatgaaaatatttggtcgtgggggattccaggc
tggcgtttagatctcattgaagccttattgaaagccttaccaaaagataaacgtcgtaac
ctcgtaccaattccagatacggcgcgtaagctcatgcaaggtattgatgctgtacatttg
cgacaacatatctttagctatctggcgtttgctttacgtggtgagcagattacggaaaaa
gatttttcatttgaacgcatagatccgtatttggtgccttttattaaggtgattgatgaa
aaaggtaaattgatcgccaaaggccgtgacttggctgagttgaaggctcgttgtcgcgta
gaaacgcatcgtccggtgaaacagcaaaaaggtgaatttaaaaccttccctgaaaacttt
acctttgaagcttcacagaaggtgacaggggttgttgttaaacaatatcaagctttagtg
ccaactaaaaattttgccgaacttgaggcgaaagatgagtctggcgtggttatacaaaca
tttaacgatcaggcagaggcgattaaacagcatcgagaaggtattattcgtctggtccat
atgcaacttggcgatttggttcgtcagttgaaaaagcagatttcgaaacctcttgcgttg
gcttattcacctttaggcgataaagctaaacttgagcaaatgctggtatacgcgacttta
caaatggcaattacgactttgccaatcaatgctgatgaatttaatcaactgctagaacag
gtcaaaaaacaatttttgagctatgggcagcaagcacttgagcaattaagtgatatttat
attcagtggcaacaaatccgtcgtcaacttttagtacttgatccggacgtatttggacgc
agtatcgatgatattgaagatcaactcgatttaatgtcactcggcaattttgtctattgc
cagccagttgatctttggcaggaatatccacgttatttaaaagcgctgctattgcgttta
gatcgattgccaaataatctacagcgagatcatgctgctattgacgatgtcgatccatgg
atggacaaggtatttaagttcaaaaatgatccaagaatcaaagaattgtacttgatgctg
gaagaattacgtatttctttattttctcagccgatgaaaaccaagatgcctatttcgcca
actcgactacaaaagttatgggatcgtttgggaatcagttaa
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