Acinetobacter baumannii AYE: ABAYE1965
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Entry
ABAYE1965 CDS
T00667
Symbol
rnd
Name
(GenBank) ribonuclease D, processes tRNA
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aby
Acinetobacter baumannii AYE
Brite
KEGG Orthology (KO) [BR:
aby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aby03016
]
ABAYE1965 (rnd)
Enzymes [BR:
aby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ABAYE1965 (rnd)
Transfer RNA biogenesis [BR:
aby03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ABAYE1965 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
CAM86843
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All DBs
Position
complement(2019844..2020968)
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AA seq
374 aa
AA seq
DB search
MFQFIQQQTELVDVLQQMDQCSTYGLDTEFIKVDTLWPKLGVCQVNVNGNVYLLDGVSLD
LSKFWKKIFLAQQNIFHACGEDIDLIYHYADEQNLLNVFDTQVGLSFLGHGLQVSYQGAL
KLCLEIDIEKDQTRSDWLARPLSPQQLCYAANDVLYLMQLANHIKDQLKQKGLYEYVLED
CSSLTKEIISETPTPLLYTDVGNYRHSRRQLMQLQNLSEWREEVVRATNQPRSFILRNST
MIDLVEKNPRNSFQLSQVKDIRPNVVREYGKIILDLLKDLPVEGHWPAKIAKPFKITSKE
TLNKMDALIAKAIEQTSIPKEVLLRKKWLNAIHQHVLTKGDEQDLPDYLLGWRYELLTKP
LIQLFKEEKASLLF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtttatccaacagcaaaccgaattggttgatgttcttcaacaaatggatcaa
tgttcaacttatgggcttgatacagaatttattaaggttgataccctttggcctaaactt
ggagtatgtcaagtcaatgtcaacggaaatgtatatttattggatggagtgtctttagat
ttaagcaagttttggaaaaaaatctttcttgctcaacaaaatatttttcatgcatgtggt
gaagatattgatttaatctatcactatgccgatgaacaaaacctattaaatgtttttgat
actcaagttggattatcctttttgggacatggtttacaagtaagttatcaaggtgcatta
aagctttgtttagagattgatattgaaaaggatcagactcgatcagactggttggcacgt
cctttatctccgcaacagctatgctatgcggcaaatgatgttttataccttatgcaattg
gctaaccatattaaagatcagcttaaacaaaaagggctttatgagtatgttcttgaggat
tgtagtagcttaaccaaagaaattattagtgaaacaccaaccccattgttatatacagat
gtgggcaattatcgtcattcacgtcgtcaattaatgcaattgcaaaatttaagtgagtgg
cgtgaagaggtagttagagcaactaaccagccacgtagttttatccttagaaactcgacg
atgattgatttagtcgaaaaaaatccacgcaatagtttccaattatctcaagtaaaagat
atccgtccgaatgttgtccgtgaatatggaaagattattcttgatcttttaaaagactta
cctgttgaaggacactggccagctaaaattgctaaaccttttaaaattacatccaaagaa
accctaaataaaatggatgcattgattgctaaagcgatagaacaaacctctataccaaaa
gaagttttacttcgtaagaaatggttaaatgcgattcatcagcatgtgcttactaaaggt
gatgaacaggatctcccagattatttattgggttggcgctatgagcttttaactaagccg
cttattcagttatttaaagaagagaaagccagtcttttattttag
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