Acinetobacter baumannii AYE: ABAYE3335
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Entry
ABAYE3335 CDS
T00667
Symbol
topA
Name
(GenBank) DNA topoisomerase type I, omega protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aby
Acinetobacter baumannii AYE
Brite
KEGG Orthology (KO) [BR:
aby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aby03032
]
ABAYE3335 (topA)
03400 DNA repair and recombination proteins [BR:
aby03400
]
ABAYE3335 (topA)
Enzymes [BR:
aby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABAYE3335 (topA)
DNA replication proteins [BR:
aby03032
]
Prokaryotic type
DNA Topoisomerases
ABAYE3335 (topA)
DNA repair and recombination proteins [BR:
aby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABAYE3335 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_C_rpt
DUF7351
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
CAM88133
LinkDB
All DBs
Position
complement(3376390..3379026)
Genome browser
AA seq
878 aa
AA seq
DB search
MANTSRSASQSTASSASAAHKRALVIVESPAKAKTINKYLGSQYIVKSSVGHVRDLPTGG
SKSTEKKPAARTKLTEAEKEQKANQALINRMGVDPEHGWQAHYEVLPGKENVVAELKKLA
KDADAIYLATDLDREGEAIAWHLREVIGGDDSRYHRVVFNEITKNAIQEAFKQPTRLDLN
RVNAQQARRFLDRVVGFMVSPLLWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYW
QVFADTKAKKDDIRLEAVKQAGKTLKLKNKAETDALLDVLKGAEYKVAQREDKPTKVNPS
APYITSTLQQAASTRLGFSVKKTMMLAQRLYEAGFITYMRTDSTFLSDDAVSMVRAHIES
QYGEKYLPAKPNRYGNKAGAQEAHEAIRPSNVALTGDQLAGVERDAQRLYDLIWRQFVAC
QMTPAEYLSSTLTVEAGNVELKAKGRTLVFDGFTKVRGANKSDDDIILPAIKVGEILKLE
KLDPSQHFTKPPARFTEASLVKELEKRGIGRPSTYAAIISTIQERGYVKLENRRLFAEKM
GEIVTDRLDESFNNLMNYAFTADLEGQLDRVATGERNWKELLDTFYGDFKKRLTNAQGEQ
GMRRNQPVEVPAVHCPECSRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLTPVESLAA
LSDDDSAETADLMSKHRCPKCGTAMDSYVIDGGRKLHVCGNNPDCDGYELEEGEFKIKGY
DGPTIPCDKCDGEMQLKTGRFGPYFACTSCDNTRKVLKNGQPAPPRVEPIKMEHLRSTKH
DDYFVLRDGAAGLFLAASKFPKIRETRAPKVAELRSVADQLDPKYQFILQAPDVDPEGNP
TIVKFSRKNQSQYVGSETPEGKQTKWSLIYQDGKWIEG
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacctcgcgctctgcatctcaaagcacagcatcttctgcctctgctgcacat
aaacgtgccttagtgattgtggagtcgcctgccaaagcgaaaaccatcaacaaatattta
ggttcgcagtacattgttaagtcttctgtaggtcacgtacgtgacttgccaacaggcggc
agtaaatcaacagagaaaaagccggctgcccggacaaaactcactgaggctgaaaaagaa
caaaaagcgaatcaggctttaatcaatcgtatgggtgtcgatccggaacatggatggcaa
gcgcattacgaagttctgcctggcaaagaaaatgttgttgctgaactcaagaaacttgct
aaagatgcagatgcaatctatctcgcaacggacttggatagagaaggggaagcaatcgct
tggcacttacgcgaagtgattggtggtgacgatagccgttatcatcgtgtggtatttaac
gaaattactaaaaatgccattcaagaagcatttaaacagccaacacgtctcgacttaaac
cgtgttaatgcacaacaagcacgtcgtttcttggaccgtgtagtaggcttcatggtttcg
ccgttactgtgggaaaagattgcccgtggtttatcggcaggtcgtgtacagtctgtagcg
gtaaagcttgttgttgaacgtgaacgtgaaattcgtgcttttattccagaagaatattgg
caagtctttgcagacactaaagctaaaaaagatgacattcgtcttgaggctgttaaacag
gcgggtaaaacgcttaaattaaaaaataaagctgaaacagatgccctgttagatgtatta
aaaggcgctgaatataaagttgcccaacgtgaagataaaccaactaaggtgaatccaagc
gccccatacatcacgtcgactttgcaacaagctgcaagtacacgtttaggtttctctgta
aagaaaaccatgatgttggcgcagcgcttgtatgaagctggtttcattacttatatgcgt
actgactcaacgtttttgagtgatgatgctgtaagtatggtacgtgcgcatattgaaagc
caatatggcgaaaaatatttaccagctaagccaaatcgctatggtaataaagcaggtgct
caagaagcccacgaagctattcgtccatcaaatgttgcgctgactggtgatcaacttgct
ggtgtagagcgcgatgctcagcgtttgtatgatttaatttggcgtcagttcgtagcttgc
caaatgactccggcagaatatttatcttcaactttaacagttgaagctggcaatgtggag
ttaaaggcaaaaggccgtacgcttgtatttgatggctttactaaagttcgtggtgccaac
aaatctgatgacgatatcattttacctgcaattaaagtgggtgaaattttaaagctagaa
aagctagatccaagtcagcattttaccaaaccaccagctcgttttactgaagcatcttta
gtaaaagaacttgaaaaacgtggtattggtcgtccgtcgacttatgctgccattatttct
acgattcaagaacgtggttacgttaagttagaaaatcgccgtctctttgccgagaaaatg
ggtgagatcgtaacagatcgtcttgatgaaagttttaataacctaatgaattatgcattt
actgcagatttagaaggtcagttggaccgtgtagcaacgggtgagcgtaactggaaagaa
ttgttagacacattctatggtgattttaaaaagcgtttgaccaatgctcaaggtgagcag
ggaatgcgtcgtaaccaaccagttgaagtaccagcagtacattgtcccgaatgttcgcgt
ccaatgcagattcgtacgggcactacaggcgtattcttagggtgttctggctataacttg
ccgcctaaggaacgctgtaaagggaccttgaacttaacgccagttgagtctttagcagcg
ttatctgatgacgatagtgctgaaacagcagacttgatgtcaaaacatcgttgtccgaaa
tgtggtacagcaatggacagctacgtcattgatggtggccgtaagttacatgtttgtggt
aacaacccggattgcgatggctatgagcttgaagaaggcgagttcaagatcaaaggttat
gatggcccaaccattccatgtgataaatgtgatggtgaaatgcagcttaaaactggccgt
tttggtccgtatttcgcttgtacaagctgtgacaatactcgtaaagtcttgaaaaatggt
caacctgcaccaccacgtgtagaaccaatcaagatggaacatttgcgttcaaccaagcat
gatgattattttgtgttacgtgatggcgcggctggtctgttcttggctgcaagtaagttc
ccgaaaattcgtgaaacacgtgcaccaaaagttgctgagcttcgtagcgtagctgatcaa
cttgatccaaaataccagtttattttacaagctccagatgtagaccctgaaggtaaccca
accattgtgaagtttagtcgtaagaaccaatcacaatatgtgggttctgaaacaccagaa
ggtaaacaaactaaatggagcctaatttatcaagacggtaaatggattgaaggctaa
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