Acinetobacter baumannii MDR-ZJ06: ABZJ_00616
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Entry
ABZJ_00616 CDS
T01820
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
abz
Acinetobacter baumannii MDR-ZJ06
Brite
KEGG Orthology (KO) [BR:
abz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abz03009
]
ABZJ_00616 (rlmD)
Enzymes [BR:
abz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ABZJ_00616 (rlmD)
Ribosome biogenesis [BR:
abz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ABZJ_00616 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
MTS
Ubie_methyltran
Methyltr_RsmB-F
TRM5-TYW2_MTfase
Methyltransf_23
TRAM
Methyltransf_11
Cons_hypoth95
CMAS
GCD14
Methyltransf_32
Methyltransf_12
UPF0020
PrmA
RrnaAD
FtsJ
DOT1
Methyltransf_15
TrkA_N
MetW
Motif
Other DBs
NCBI-ProteinID:
AEP05076
UniProt:
A0A654KXB1
LinkDB
All DBs
Position
1905738..1907129
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AA seq
463 aa
AA seq
DB search
MKQQAKSRKPQQPEYIFQVETLSHEGRGIAHYGSHPDHPADKHGKKVFIRYALPGETVKA
QITHEAKRLEEAEMVALLAEPSANRVEAVCPHYGICGGCSMQHIHPDEQICLKQNVLQSH
LQHFAGIQPEQWLEPIRSLQSDYRRRARIGVRYLPKQDRLILGFREHHSNRLTSIHTCSV
LDKKLSDSLPELRNLLQSLKGKAHIGHVELAKGDYETSLLVRHIEKLNNADVNQLRQFAL
HKGWQLYLQPKGPESLRRIDEEQGAMRLHYALNAFDVNFAFSPLDFTQVNATVNEQMVQL
ACELLQLQQGERVLDLFCGLGNFSLPLARCVGAKGQVVGVEASEEMVQRATDNAKRNNLV
QASFFSQDLTKDFSHHSWANQGFDALLIDPPRAGAYEIMQYVPNFGAKRIVYVSCNPATL
ARDAGVLVQHGYQLKKAAVMDMFTHTEHVESIALFEKIQEIND
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagcaagccaaatctcgtaaacctcaacaacccgaatatatttttcaggttgaa
actctttctcatgaggggcggggaattgcgcattatggttctcatccagaccatccggca
gataagcatggtaaaaaagtgtttattcgttatgcgttgcctggagaaacagtaaaagcc
caaattacgcatgaggctaagcgacttgaagaagctgaaatggtagcgcttttagcagaa
ccttcagcaaatcgtgtagaggcagtttgtcctcattatggtatttgcggtgggtgtagc
atgcagcacatccaccctgatgagcagatctgtttaaagcaaaatgtccttcagtcacac
ttgcaacactttgctggtattcagcctgaacaatggttagaaccaattcgttctttgcaa
agtgattatcgccgtcgtgctcgaataggtgtgcgctatttgccaaaacaggaccgtttg
attctaggttttcgtgagcatcatagtaatcgtttaacatctatccatacttgtagcgtt
ttggataaaaagttatcagatagtctgccggaattgcgtaatttactccaaagtctaaaa
ggcaaagcgcatattggtcatgtagaattagcaaaaggtgattatgaaacatctttatta
gttcgtcatatcgaaaaactaaacaatgctgatgtcaaccaattaagacaatttgcgtta
cacaaaggctggcagttgtatttgcaacctaaaggacccgaaagtcttcgtcgtattgat
gaagaacaaggagctatgcgattacattatgctttaaatgcatttgatgtaaattttgct
ttttcgccattggattttacgcaggtcaatgccacagtaaatgaacaaatggtgcaattg
gcatgtgaattgcttcaattgcaacagggtgaaagagtactagatctgttttgtgggtta
ggtaatttttcgcttccacttgcacgatgtgttggtgcaaagggtcaggttgtaggtgtg
gaagcaagtgaagaaatggtgcagcgggcaacagataatgcaaagcgtaataatctggtg
caggcaagcttcttttcacaagatttaacaaaagatttttcgcatcattcttgggcaaat
caaggatttgatgcattattgattgatcctcctcgtgctggtgcatatgaaattatgcag
tatgtaccgaactttggagcaaaaagaatcgtttatgtatcatgtaatccagcaacatta
gcaagggatgcaggtgttttggttcaacatggttaccagttaaaaaaagcagcggttatg
gacatgtttacgcacacagaacatgttgaatcgattgctttatttgagaaaattcaagag
ataaacgattaa
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