Acinetobacter baumannii MDR-ZJ06: ABZJ_03423
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Entry
ABZJ_03423 CDS
T01820
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
abz
Acinetobacter baumannii MDR-ZJ06
Pathway
abz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABZJ_03423 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abz03019
]
ABZJ_03423 (rnr)
03016 Transfer RNA biogenesis [BR:
abz03016
]
ABZJ_03423 (rnr)
Enzymes [BR:
abz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ABZJ_03423 (rnr)
Messenger RNA biogenesis [BR:
abz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABZJ_03423 (rnr)
Transfer RNA biogenesis [BR:
abz03016
]
Prokaryotic type
tRNA degradation factors
ABZJ_03423 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AEP07883
UniProt:
A0A654L4Z2
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All DBs
Position
781869..784301
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AA seq
810 aa
AA seq
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MKPNDMTKNWVDPEAKAEAERYDNPIPSRTLILDTLEQLQTPQSHAELVDHFHIQDQKSI
EALSHRLSAMVRDGQLMKDGFKFQLVADQPTYEATVYINSKGLGTAHIDGQDDLLLPERE
LRLVFNGDRVRVRQTSVDRKGKPWGFITEVIQHRVKQLIGKLSVHEGEYFIQPNNPNQHQ
PIPLEKELVEHAKANVGDMLRVAIDTYPTREEFATAHIIQSMADKADTEIIIPQTILEFG
LPYEFPDEVIKEAESFKEPAEQDREGRVDLRDLALVTIDGEDARDFDDAVYAEKRPGGGY
RVVVAIADVSHYVRLDSALNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCM
VCDLKLSRTGRVTGYEFYPAVMHSKARLTYTQVGQYFEGATDAIPKDRDIHKSLNTLFQL
YQILKNLRVDRHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEY
ALEHDIPMLYRVHEAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQKVIEATKDRIDAPSI
HAVLLRSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLKQKPYPLSG
AALDDAGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFIGIVSAVTEFGLFVTLKDL
YVDGMIHISQLGDDFFIYDQASQNLIGQNRGQVFGLGDEVKIQVAGVNLEERKIDFQLIK
QVTHAGRVVRSRAPRTTKTSTQATEEVFGKPSVSTDGEKPVRKKKEKGKPSSYSKKSGKK
TSTKAEAKPEKVKKKAKPKKKKSNAKSKAD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaacgacatgacaaaaaactgggttgaccccgaagcaaaagccgaagctgaa
cgttatgacaatcctattccaagccgtactcttattttagatacgttggaacaattgcaa
acaccgcaatctcatgcagaacttgttgaccattttcatattcaagatcagaaaagtatt
gaagccttaagtcatcgcttaagtgctatggttcgtgatggccaacttatgaaggatggt
tttaagtttcagttggtggcagaccaacctacctatgaagcaactgtctatattaatagt
aaaggtttgggtacagcacatattgatggtcaagatgatttgttattacctgagcgtgag
ttacgtttagtctttaatggtgatcgggtccgtgttcggcagacatcggtagatcgcaaa
ggtaaaccatggggtttcattaccgaagttatacagcatcgagtaaaacagttaattggt
aaattgtcggtacatgagggcgaatattttattcagcctaacaatccaaatcagcatcaa
cctatcccactagaaaaagaattagttgaacatgctaaagcaaatgtcggcgatatgctt
cgtgttgctatagacacttacccaacccgggaagaatttgcaacggcacatattattcag
tctatggcagataaagccgatactgaaattattattccgcaaaccattttagagtttggt
ttgccttacgaatttccagatgaagttataaaagaagctgaaagtttcaaagaacctgct
gaacaagatcgcgaaggtcgagttgatttaagagacttggcacttgtcacaatcgatggt
gaagatgcgcgagatttcgatgatgcagtatatgcggaaaaacgtcctggtggtggttac
cgagttgtcgttgcaattgccgatgtgagccattatgtacgattagattcggcattaaat
gaagaagctgaagagcgcggcacttcggtttattttccacattttgttttaccaatgcta
ccagaagcattatcaaatggattgtgttcacttaacccacacgtagatcgtttatgcatg
gtctgtgacctaaaactttctcgtacgggtcgtgttacaggttatgaattttatccggca
gtcatgcattcaaaagcacgtttgacctatacacaagtaggacaatattttgaaggtgcc
actgatgcaattccaaaagatcgtgatattcataaatcgctaaatacacttttccagctt
taccagattttgaaaaacttacgtgttgatcgtcatgcaatggagtttgaaaccattgaa
acttatatgacctttgacgagttaggtggaattaaagaaattttacctcgtacacgtaat
gatgctcataagcttattgaagagtgtatgttgcttgccaatgtagcagcagcagaatat
gccttagaacatgatattccgatgttgtatcgtgtacatgaggcacctgaattctcacgt
attcaaaaagtaaaagattttgtaaaactattgggtttacctttccctgaccaaccaact
caggcagactatcaaaaagttattgaggcaactaaagaccgtattgatgcgccaagcatt
cacgccgtgttattacgctcaatgatgcaagcttactatggtgccaaaaatgcaggtcac
tatggtttagcttatgaagcttatacacatttcacttcaccaattcgccgctacccggac
ttattgttacatcgtgcaattaaagctcatctaaaacaaaagccttacccactttccggt
gcagctttagatgatgcaggtgaacatttctctcaaacagaacgccgtgccgatgaagca
tcccgcagcgtaacgacttggttgaaatgccactatatgcaacaacatttaggtgatgag
ttcattggtattgtgagtgcggtaactgaatttggcctatttgttactcttaaagatctt
tatgttgatggcatgattcacattagccaacttggcgatgatttctttatttacgatcaa
gccagtcaaaacctcattggacaaaatcgtggtcaagtcttcggtttaggcgatgaagtt
aaaattcaagttgctggtgtaaatctagaagagcgtaaaatcgatttccaactcattaaa
caagttactcatgctggacgtgtagttcgtagtcgtgctccacgcacaaccaaaactagc
acacaagcaacagaagaagtttttggtaaaccatctgtatcaactgatggtgaaaaacct
gtccgtaaaaagaaggaaaaaggcaaaccaagttcatatagtaaaaagtcgggtaagaaa
acctctacaaaagcagaggccaaaccagaaaaagtaaagaaaaaagcgaaacctaaaaag
aaaaagtcaaacgccaagtctaaggctgactaa
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