KEGG   Acidobacterium capsulatum: ACP_0780
Entry
ACP_0780          CDS       T00868                                 
Symbol
csd1
Name
(GenBank) CRISPR-associated protein, Csd1 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
aca  Acidobacterium capsulatum
Brite
KEGG Orthology (KO) [BR:aca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:aca02048]
    ACP_0780 (csd1)
Prokaryotic defense system [BR:aca02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    ACP_0780 (csd1)
SSDB
Motif
Pfam: Cas_Csd1 TPR_IF140-IFT172
Other DBs
NCBI-ProteinID: ACO32176
UniProt: C1F2B8
LinkDB
Position
complement(898855..900711)
AA seq 618 aa
MFVQALAGYADTHLRKQLDDVAFEERPVQYFLQIGKDGSFLGVIPRFTEVPVASPKQKKG
SADKPPKTRLQPELLSVPRSPANRNSGLHPLLGSDDIKYVLGPGPWTKASELENHRDRHE
AFVELLRRVAKETRDRALEICAQFYDQPEQVERAREALAKVTPGSNVALFVFGQPVTERD
EVRAWWRQHYEASTAERGAGQTAECLISGVVGPIPSTHAKIKGTSALGGQPAGVSLMSFD
KPAFRSYGWEQNANSPVSSDRAMAYVLALNDLLKPGSQNRKDFDGVAFLFWLKRDVDIDY
NSLLEEPPSDVLLDKARAIIGLKNGAWMRQEERNELYMAAVSATGSRLVLRSWSSMPLED
ALESLLGFWEQLKMQPLEKDKPPRAEPFWKLLHALDREGRPPASRTVALRRRALEGRCSP
LGYRIVSDVLARMRADKEKRRDIAALGLLRLCLNDLHATTGKGEPMPAALDETEPPQHPA
YVCGRLLALHDSLQWRTFDAAEEAQPNATVADRYYTLMMNSPAIGVAKVFDLGRKHLSKL
RKLDAKSGTSYCDYFTRRICELEEHLGGEPPVQFDLHDKARFALGFYHEKAPRFRARKAE
SISTKLQANSNSTDEENQ
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgttcgtacaagcgctagccggatatgctgacacgcaccttcggaagcagttagacgac
gtggcgttcgaagagcgccctgtgcagtactttctgcagatcgggaaggatggaagcttc
ctgggtgtgattccgcgattcacggaggtgccagttgcatcaccaaagcaaaagaagggt
tcagcggataagccgccgaaaacacgcctccagcccgagctcttgtcggttccccgctct
ccggcgaatcgaaattcgggactccatccgctgctcggctccgacgacatcaagtatgtg
ctggggccgggtccgtggacgaaggcaagcgaacttgagaatcaccgcgaccggcacgaa
gcttttgtagaactgcttcgtcgtgtcgccaaagagaccagggaccgcgcactggaaatc
tgtgcccagttctacgaccagccggagcaggtagagcgtgcgcgagaagcgctggcgaag
gtcactcccggttccaacgttgccctgttcgtcttcggccagcccgtgacggagcgcgac
gaagttcgtgcgtggtggaggcagcattacgaagcgagcacggcagagcgcggagccgga
cagactgccgaatgtctgatatccggagtcgtagggccgattccgtcgacgcacgcaaag
atcaaaggcacgtcagcgctcggtggtcagccagcgggcgtgtccctcatgtccttcgat
aaacccgcattccgctcatacggatgggagcagaacgccaacagtcctgtttcgtcagat
cgtgccatggcctatgtgctcgcccttaacgatctcttgaaaccgggcagccaaaaccgc
aaggatttcgacggcgttgccttccttttctggctcaagcgcgacgtggacatcgattac
aactcgctgctcgaagagccgccatcagacgttctactcgataaagcgcgtgccatcatc
ggtctgaagaacggtgcctggatgcgccaggaagagcgaaatgaactctacatggctgcg
gtgtcggccacgggcagccgccttgtgctacgctcctggtccagcatgcccctggaagat
gcattggagtcgctcctcggcttctgggaacagctcaaaatgcagccgctggaaaaagac
aagccgcctcgcgcagagcccttctggaaactgcttcatgcacttgaccgcgagggcagg
ccgcccgcaagccgcaccgttgcgcttcgcaggcgcgcgctagagggccgatgcagtccg
ttgggttaccgcatcgtgtcggatgtgctcgcccgcatgagagcagacaaggaaaagcgc
agagatatcgccgcactcggactgctccgtctatgcctcaacgatcttcacgctaccacc
ggaaaaggagaacctatgcctgccgctcttgatgagaccgaaccgcctcagcaccctgcg
tatgtttgcggaaggttgctggcactgcacgatagcctgcagtggcgcacctttgatgcc
gcagaggaagcccagccgaatgccacggtcgcagaccgctattacacgctgatgatgaac
tcgccggcgatcggggttgcgaaggtctttgaccttggaaggaagcacctcagcaaactc
cgcaagctggatgcaaaatccggcacaagctactgcgattatttcactcgcaggatctgt
gaattggaagagcatctcggaggggaacctcccgtgcagttcgatttgcacgacaaggcc
cgatttgcgctgggcttttatcacgagaaggccccccgttttcgcgctcgtaaagcagaa
agtatctccaccaaacttcaagccaattcgaactccaccgatgaggagaaccagtga

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