Acidobacterium capsulatum: ACP_1673
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Entry
ACP_1673 CDS
T00868
Name
(GenBank) ribonuclease, Rne/Rng family, insertion
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aca
Acidobacterium capsulatum
Pathway
aca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP_1673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aca03019
]
ACP_1673
03009 Ribosome biogenesis [BR:
aca03009
]
ACP_1673
Enzymes [BR:
aca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ACP_1673
Messenger RNA biogenesis [BR:
aca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACP_1673
Ribosome biogenesis [BR:
aca03009
]
Prokaryotic type
rRNA processing factors
ACP_1673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
BrnA_antitoxin
Motif
Other DBs
NCBI-ProteinID:
ACO34417
UniProt:
C1F7B7
LinkDB
All DBs
Position
complement(1992441..1995482)
Genome browser
AA seq
1013 aa
AA seq
DB search
MAKEICISSTPHETRLAILEDDQLAEIYYERENEYTLAGSIYKGRVTRVLPGMQSAFVDI
GLERDAFLYVTDFLEEQEDSDEYERVSTGQRPQAQQRAQSSQSQPSASQSQSQSPAQRAE
AAPGGEAESGDGEDARGARRWRGRRGRRRGVRGRGQQEETSESTGLEAAPGEVEAVEFSA
AAEPAASPDAYRAVHREHHEAVAHHHAPAETEEAAHTPFVLPGESLSRYGGKPAGSGSSS
EGTESAKPKAEVFAKPSTLVEAPITDWDGGFVLPGESISRRRKGAATAPVESLPESAPEP
EVIAAPAAEAVPVAEAVEVPAPAEIAAVAEAPEAQAAVEAIEEATEADAVHEAVEAAAPA
ATPVEEHLDGIEEVVEEVHEFEPEEGSASHRVDPSAPSEFRISPPESEDFHEETEDEDED
ETEEVTEEVTVAAEPEPEVSHEEADAIADATHEAAEAAAAPGETDIYGLAAGAGVFEEEE
IDDDEYDFELLHDPAFEEHEADDLEEETLDQGAYLGEVVREAHLEERLGVSDGEEEDAAE
EEDDEDEQGFAEVSEDFDEDAAESEEESGEPRAAAPARREGRKFDRRRGRQGGGRQRHGG
GGGHRRASVQTMDLPIISDLLKQGQEILVQIAKEPIAKKGARITSHIALPGRFLVFMPTV
NHVGVSRKISSDEERQRLKRILISEKGDATGGFIVRTAAEGAGEDELRADIRFLINLWNE
IKERSDSGKAPALIYHDLNLVERILRDQVSEEFSTIWVDSETDYERIVRFLNRFQPSLVR
RVKLYTKEMPLFEQFGIQDEITKALKSKVWLKSGGSIVINQTEALVAIDINTGKYVGKTA
RLEDTIVKTNLDAIPEIVRQIRLRDLGGIIVIDFIDMDERKNRHKVLQALEEELKHDRAP
SKVLQFNDFGLVAITRKRVKQSLERTLSIPCNICTGTGMVKSPATVANEIYVEMRKMQRH
LENKDVLLRVNPEVVKTLKASGGRWLNELEEMTGKTIIVKSDPTLHPEQFDIH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaatatgcatctccagcacgccgcatgaaacgcgtctggcgattcttgaa
gacgatcagctcgcagagatttactacgagcgcgaaaacgaatataccctcgcgggttcc
atctataagggccgcgtcacccgcgtgttgcccggcatgcagtcggctttcgtcgacatt
ggtctcgaacgcgacgcattcctttacgtcaccgactttcttgaggagcaggaagactcc
gacgagtacgagcgcgtctccacgggccagcgtccgcaggcccagcagcgcgcccagtct
tcgcagtcccagccgtccgcgtcccagtcccagagtcagtccccggctcagcgggccgag
gccgcaccgggtggcgaagctgaatcgggcgacggtgaagatgcgcgtggcgcgcgccgc
tggcgtggccgccgtggccgccgccgtggcgtgcgtggccgcgggcagcaggaagaaaca
tccgagagcacgggcctcgaagcagcgccgggagaagtggaagccgtagagttctccgcc
gccgccgagccggccgcatccccggatgcatatcgggccgtccaccgggagcatcacgag
gctgttgcgcaccatcatgcgcctgccgagactgaagaggccgcccacacgccgtttgtg
ctgcccggcgaatcgctctcccgctacggcggcaagcctgccggttccgggtcgtcctcc
gagggcacagaatctgccaagccgaaggccgaagtcttcgccaagccctccacgctggtc
gaagcgcccatcaccgattgggacggcggcttcgtgctgccgggcgagtccatctcgcgc
cgccgcaaaggcgcggccacggctcctgtggaatcgcttccagagagcgccccggaaccc
gaggtgatcgccgcgcccgctgccgaagctgtccccgttgctgaagctgtcgaagtgccc
gctcccgccgaaatcgcggctgtagccgaggcgcctgaagcgcaggccgccgtcgaggcc
atcgaagaagccaccgaagccgatgcggttcatgaagccgtagaagccgctgcgcccgcc
gccacgccggtcgaagaacatctggatgggatcgaagaggtcgtcgaggaagtgcacgag
tttgagcccgaagaaggctcggcctcgcaccgcgtcgatccctcggccccgagcgaattc
cgcatcagcccgcccgagtctgaagactttcacgaggaaacggaagacgaagacgaagac
gagaccgaggaagtgaccgaagaagttacggtggctgccgagcccgagccggaagtctcg
cacgaagaagccgatgccatcgccgacgccacgcacgaggcggccgaagccgctgccgcg
cccggcgaaaccgatatctacggccttgccgccggggccggcgtctttgaagaagaagag
atcgacgacgacgaatacgactttgagctgctgcacgacccggcctttgaagagcacgag
gccgacgatctcgaagaggagacgctcgatcagggcgcttacctcggcgaagtggtgcgt
gaggcacatctggaagagcgcctcggcgtctccgatggcgaagaagaagacgcagccgaa
gaagaggacgacgaagacgagcagggctttgccgaagtcagcgaagactttgacgaagac
gccgctgagtcggaagaggagtccggcgagcctcgcgccgccgcgcccgcccgccgcgaa
ggccgcaagtttgaccgccgccgtggccgccagggtggtggacgccagcgtcatggcgga
ggcggcggccatcgccgcgcttctgtgcagacgatggacctgcccatcatcagcgacctg
ctgaagcaagggcaggagatcctggtgcagattgccaaggagccgatcgccaagaagggc
gcgcgcatcaccagccacatcgcgctccccgggcgcttcctggtcttcatgcccaccgtc
aatcacgtcggcgtctcgcgcaaaatctcttctgatgaagagcgccagcgcctcaagcgc
attttgatcagcgagaagggcgacgcgaccggcggcttcatcgtgcgcaccgccgctgaa
ggcgcgggcgaagacgagctgcgcgcggatatccgcttcctcatcaatctctggaacgag
atcaaggagcgctcggattccggcaaggctcccgcgctgatttatcacgacctcaacctg
gtcgagcgcattctgcgcgatcaggtcagcgaagagttctcgaccatctgggtggactct
gagacggactacgagcgcattgtccgcttcctcaaccgcttccagccgtcgctggtgcgc
cgcgtcaagctctacaccaaagagatgccgctctttgagcagttcggcattcaggacgag
atcaccaaggccctcaagtccaaggtctggctcaagtccggcggctcgatcgtcatcaac
cagaccgaggcgctggtggccatcgacatcaacaccggcaaatatgtcggcaagacggct
cgcctggaagacaccatcgtcaagaccaacctcgatgccattcctgaaatcgtgcggcag
attcgcctgcgcgacctgggcggcatcatcgtcatcgacttcatcgacatggacgagcgc
aagaatcgccacaaggtgctgcaggctctcgaagaagagctcaagcatgatcgcgctccg
tccaaggtgctgcagttcaatgacttcggcctggtcgccatcacgcgcaagcgcgtcaag
cagtcgctggagcgcacgctgagcattccctgcaacatctgcaccggcaccggcatggtc
aagagcccggcgacggtggccaacgaaatctatgtggagatgcgcaagatgcagcgccat
cttgagaacaaggacgttctgctgcgcgtgaaccctgaggtggtgaagaccctcaaggca
agcggcggccgctggctcaacgaactcgaggagatgacgggcaagaccatcatcgtcaag
agcgatcccacgctccaccccgagcagtttgacatccactag
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