Acidobacterium capsulatum: ACP_1875
Help
Entry
ACP_1875 CDS
T00868
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aca
Acidobacterium capsulatum
Brite
KEGG Orthology (KO) [BR:
aca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aca03400
]
ACP_1875 (phrB)
Enzymes [BR:
aca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ACP_1875 (phrB)
DNA repair and recombination proteins [BR:
aca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ACP_1875 (phrB)
Prokaryotic type
ACP_1875 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ACO33611
UniProt:
C1F868
LinkDB
All DBs
Position
complement(2216737..2218149)
Genome browser
AA seq
470 aa
AA seq
DB search
MPRALQQFSQDARVTVRRNGAPLPQGKCVVYWMQRAQRALDNPALDMAIRIGNELGLPVV
AYFSAISNFPHANLRHYVFLNQGLADIEEDMAERNVTFIVRRPPGNSLEQLLEEVQAAML
IGDENPCREPERWRQVIAKRLNMPYWTIDADVVVPSNLFPKHQYMVHIFRKRFEPLLPQY
LVPQPVIQAEKSWPHPKGFEAFDVRHDVTEGWSKFDRSVKPVDSFHGGTHEAQRLLKDFV
TNKLANYPKERNHPELDGTSRLSPYLHFGHISPLTIALAVEDAHKNKHASREACDSYLNE
LIAWRDMAVNFVKFVPGYDSFEAAPEWAQKTLREHARDTRDPIYTLEELERAETCDELWN
AAQRQMLHAGWMHNYMRMYWAKKILEWSPSPVQAWETCVYLNDRYFLDGRDPNGYAGIAW
AIGGVHDRPWFERDIFGTIRYMSGNAAAKKFDATRYIRQMEELAESAQAE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgggcactgcagcaattcagccaggatgcgcgggtgacagtgcgccgcaacggc
gctccgcttcctcagggcaagtgcgtcgtctactggatgcagcgcgcgcagcgggccctc
gacaatcccgcgctcgacatggccattcgcatcggcaacgaactgggccttcccgtcgtg
gcttacttttccgcaatctctaatttccctcacgcgaatctgcgtcattacgtgtttctg
aatcaggggctggccgacattgaagaggacatggccgagcgcaacgtaaccttcatcgtg
cgccgccctccgggcaattcgttggagcagctattggaagaagtgcaggccgccatgctc
atcggcgatgaaaacccctgccgcgaaccagagcgctggcgtcaggtgatcgccaaacgc
ctgaacatgccttactggaccattgatgccgatgtcgtcgtaccgtcgaatctctttcca
aagcaccagtacatggtgcatatcttccgcaaacgctttgagcctctgctgccgcagtat
cttgttccgcagcctgtcatccaagccgaaaaatcctggccgcatcccaaaggcttcgaa
gccttcgacgtccggcacgatgtcactgaaggctggagcaaattcgaccgcagcgtgaag
ccggtggactcctttcatggaggcactcacgaagcgcagagactgctcaaggatttcgta
accaataaattggcaaattaccccaaagagcgaaaccatcccgaactggatggcaccagc
cgcctctcgccctatctgcattttggccacatcagcccgttgacgattgccctcgccgtc
gaggatgcgcacaagaacaagcacgcatcgcgcgaggcttgcgacagttatctcaatgag
ctgattgcgtggcgcgacatggcggtcaacttcgtaaagttcgtgccgggttacgattcc
tttgaggccgctcccgagtgggcgcaaaagacgctgcgcgagcacgcaagagatacccgc
gatcccatttatacgctcgaagagctggagcgcgctgaaacatgcgacgagctgtggaat
gccgctcagcgccagatgctccacgccggctggatgcacaactacatgcgcatgtactgg
gccaagaagattcttgagtggtcgccttctccggtgcaggcatgggaaacctgtgtctat
ctgaacgaccgctacttccttgatggccgcgatcctaatggatatgcgggcatcgcctgg
gccatcggcggcgtgcatgaccgcccatggtttgaacgggatatcttcggcaccattcgc
tatatgtcaggcaatgcggcggcgaagaagtttgacgcgacgcgctatatccggcagatg
gaagagttagccgagtccgcgcaggctgagtaa
DBGET
integrated database retrieval system
