Acidobacterium capsulatum: ACP_2495
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Entry
ACP_2495 CDS
T00868
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aca
Acidobacterium capsulatum
Pathway
aca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP_2495 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aca03021
]
ACP_2495 (rho)
03019 Messenger RNA biogenesis [BR:
aca03019
]
ACP_2495 (rho)
Transcription machinery [BR:
aca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACP_2495 (rho)
Messenger RNA biogenesis [BR:
aca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACP_2495 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA
ATPase_2
AAA_25
OB_RNB
S1CSD-TOTE-2
Fungal_virus_P2_C
Spore_III_AA
HHH_RecD2
Motif
Other DBs
NCBI-ProteinID:
ACO33869
UniProt:
C1F1V0
LinkDB
All DBs
Position
complement(2881219..2882469)
Genome browser
AA seq
416 aa
AA seq
DB search
MTIAELKEKNITELSRIARSLDIPGASGLRKQDLIFKILQAQSEKEGHIFAEGVLEILPD
GYGFLRSPDYNYLPGPDDIYVSPSQIRKFDLKTGDTISGNVRPPHEGEKYFALVKIEAIN
FESPEETRNKILFDNLTPLYPEERIKMETVRDNISGRVMDLLTPIGKGQRGLIVAPPRTG
KTMLLQSIANSITANHPEVALIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAARHVQVA
EMVIEKAKRLVEHKRDVVILLDSITRLARAYNTIVPPSGKVLSGGVDSNALQRPKRFFGA
ARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNMEVILDRKLVDKRVFPAIDIQRS
GTRKEELLIPKEDLQRIWVLRKVLNPLSPVEAMELLVDKLGKTRNNAEFLLNMSSI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgctgaactgaaagaaaaaaacattactgagctgagccgcatcgcccgctcg
ctcgacattcccggggccagcggcctccggaagcaggacctgattttcaagattctgcag
gcgcagagcgaaaaagaaggccacatcttcgccgaaggcgtgctcgaaattctgcccgac
ggctacggcttcctgcgctcgcccgactacaactatctgcccggcccggatgacatttac
gtctccccctcgcagattcgaaagttcgacctcaagaccggcgacaccatcagcggcaac
gtccgcccgccccacgagggcgaaaagtacttcgcgctggtcaaaatcgaggccatcaac
ttcgagtcgcccgaggagacccgcaacaagatcctcttcgacaatctgacgccgctctac
cctgaagagcgcatcaagatggagacggtccgcgacaacatcagcggccgcgtcatggac
ctgctgacgcccatcggcaagggccagcgtggactcatcgtggctccgccccgcaccggt
aagacgatgctcttgcagtcgatcgccaactccatcaccgccaatcatcctgaagtggca
ctgatcgtgctgctgattgacgagcgccccgaagaagtcaccgacatgcagcgctcggtc
aagggcgaggttatcagctccacctttgacgagccggccgcgcgccatgtgcaggtcgcc
gaaatggtcatcgaaaaggccaagcgcctcgtcgagcacaagcgcgatgtagtcatcctg
ctcgactccatcacccgcctggcccgcgcctacaacacgattgtgccgccttcgggcaag
gtgctctccggcggcgtggactcaaacgccctgcagcggcccaagcgcttcttcggcgcg
gcccgcaacattgaagagggcggctcgctcaccatcatcgccacggccctggtcgatacc
ggctcccgcatggacgaagtgatctttgaagagttcaagggcaccggcaatatggaagtg
atcctcgaccgcaagctcgtcgacaagcgcgtcttcccggccatcgacattcagcgctcg
ggcacacgcaaggaagagctgctcatccccaaggaagacctgcagcgtatctgggtcctc
cgcaaggtgctcaacccgctctcaccggtcgaagccatggaactcctggtcgacaaactc
ggcaagacccgcaacaacgccgagttcctgctgaacatgagctccatctaa
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