Acidobacterium capsulatum: ACP_2929
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Entry
ACP_2929 CDS
T00868
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aca
Acidobacterium capsulatum
Pathway
aca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACP_2929 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aca03021
]
ACP_2929 (rpoC)
03400 DNA repair and recombination proteins [BR:
aca03400
]
ACP_2929 (rpoC)
Enzymes [BR:
aca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACP_2929 (rpoC)
Transcription machinery [BR:
aca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACP_2929 (rpoC)
DNA repair and recombination proteins [BR:
aca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACP_2929 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ACO31993
UniProt:
C1F3Y4
LinkDB
All DBs
Position
3394910..3399079
Genome browser
AA seq
1389 aa
AA seq
DB search
MTSPIADFDAIRIQLASPEKIRSWSHGEVTKPETINYRTFKPERDGLFCARIFGPVTDWE
CLCGKYKRMKHRGVICDKCGVEVTVSKVRRERLGHIELASPCSHVWFFKGLPSRIGHLLD
ISLRELESVLYFESYVVVDPGDSPLREREIIKDETKYRELDQQYRPSGFKAMMGAEAIKE
LLKRVNVDELSVELRERMKAETSLQKRLKYSKRLKVVEAFRRSGNKPQWMILDVIPVIPP
ELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKKLMDLHAPEVIVRNEKRMLQEAVDALF
DNGRRGRVLRGANNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCG
LPKKMALELFKPFIYHRLEQTGHCTTIKQAKEMVELQDPIVWDILEEVIKDHPVLLNRAP
TLHRLGIQAFEPVLVEGKAIKIHPLVCTAFNADFDGDQMAVHIPLSPEAQVEASVLMLAS
HNILSPASGHPITVPTQDMVLGLYYLTKEKQGAQGEGRAFSNIEEVLMALEFKEVETLTP
IRLRYSGPVLDMTVAYDDQDLTHTEPVIYDREFLKTTVGRAILNDALPKDMPYVNGLLKK
KGIGQLVNYCYLNLGLEITVKMLDRIKELGFQFATRSGLSVGLDDMVIPATKYPVVSDAE
KQAIAVQQQYLDGAITNGERNNKVISIWSSVTEKVADEMFDNMKKADKAGAMNPIYIMAD
SGARGSKQQIRQLSGMRGLMAKPSGEIIETPITANFREGLTVLEYFISTHGARKGLADTA
LKTADSGYLTRRLVDVAQDVIVSEHDCGTQEGIYVGPIIESGEIIEPLRDRIIGRVTLEK
LKDFEGNVITDVNQEINEDMASAIQAAGIERVKIRSVLTCESRRGICVLCYGRNLGSGRL
VELGEACGVVAAQSIGEPGTQLTMRTFHIGGTASRVSDQSRVEAKNNGMVRFINLTTVRS
KQGDLVAMNRSGSIAVLDDRGREKERYQVVYGAKLKVQDGQTVKLGDSMVEWDPYTFAIL
TEIGGTIQFKDLQEGITLHEEVDEVTGLSRLVVGESADEKRQPAILVKGSKGNKRYIMPS
RAHLMIQDGDEVSPGDILAKIPRETTRTKDITGGLPRVVELFEARKPRETALISEIDGVV
RFGEISKGQRKIYVTGDNGEEREYSLPRGIHVNVQEGERLRAGEPLMDGPLNPHDILAVL
GEKELQAYLVNEIQEVYRLQGVAISDKHIEVIVRQMLRWVKIEEVGDTSFLLEQQVDKFR
FREENDRTIAKGGRPAVGRPLLLGITKASLSTESFISAASFQETTRVLTEASINGAIDGL
RGLKENVIVGRLIPAGTGMEYYRNIQLSPELEEAAARVQQEVIAQHEAEERELEMMRAEG
EAEEMAASE
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccccatcgcggacttcgacgcgatccgcatccagcttgcgtcgcctgaaaag
attcgcagctggtctcacggtgaagtcaccaagccggaaacgatcaactaccgcaccttc
aagccggagcgcgacggcctcttctgcgcccgcatctttggccccgtcaccgactgggag
tgcctctgcggcaagtacaagcgcatgaagcaccgcggcgtcatctgcgacaagtgcggc
gtcgaagtcacggtgtcgaaggttcgccgcgagcgcctcggccacatcgagctggcctcg
ccctgctcgcacgtctggttcttcaagggcctgccgtcgcgcatcggccacctgctcgac
atctcgctgcgtgagctggagagcgtgctctactttgagtcctacgtggtcgtcgatccg
ggcgactcgccgctgcgcgagcgcgagatcatcaaggacgagacgaagtatcgcgagctc
gatcagcagtaccgcccctccggcttcaaggccatgatgggcgccgaggccatcaaggaa
ctgctcaagcgcgtgaacgtcgacgagctttcggtcgagctgcgcgagcgcatgaaggcc
gagacctcgctgcagaagcgcctcaagtattccaagcgcctcaaggtcgtcgaggcgttc
cgccgctcgggcaacaagccgcagtggatgatcctcgatgtgatcccggtcattccgccg
gagctgcgcccgctggtgccgctcgatggcggccgctttgccacgtcggatctgaacgat
ctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagaagctcatggacctgcatgcg
cccgaagtcatcgtgcgcaatgagaagcgcatgctgcaggaggcggtggacgcgctgttt
gacaacggccgccgcggccgcgtgctgcgcggagccaacaaccgtccgctcaagtcgctc
tctgacacgctcaagggcaagcaagggcgcttccgccagaacctgctcggcaagcgcgtg
gactactccggccgttcggtcatcgtcgtaggccctgagctcaagctgcaccagtgcggc
ctgcccaagaagatggccctcgagctcttcaagccgttcatctatcaccggcttgagcag
accggccactgcaccaccatcaagcaggccaaggagatggtcgagctgcaggaccccatc
gtgtgggacatcctcgaagaggtcatcaaagaccatccggtgctgctgaaccgcgcccca
acgctgcaccgcctgggtatccaggcctttgagccggtgctggtcgagggcaaggccatc
aagattcatccgctggtctgcaccgccttcaacgccgactttgacggcgaccagatggcc
gtacatattccgctgtcgcctgaggcgcaggtggaagccagcgtcctcatgctggcctcg
cacaacattctgtcgccggcctctggccacccgatcaccgtgcccacgcaggacatggtg
cttggcctctactacctgaccaaggagaagcagggcgcgcagggcgaaggccgtgccttc
tccaacattgaagaagtgctgatggcgctcgagttcaaggaagtcgagacgctgacgccg
attcgtctgcgctactccggcccggtgctcgacatgaccgtcgcctatgacgatcaggac
ctcacgcacaccgagccggtcatctatgaccgcgagttcctcaagaccaccgtgggccgc
gccatcctgaacgatgcgctgcccaaggacatgccctacgtcaacggccttctcaagaag
aagggcatcggccagttggtgaactattgctacctgaacctcggccttgaaatcacggtg
aagatgctcgaccgcatcaaggagctgggcttccagttcgcgacgcgctcgggtctctcg
gtgggcctcgatgacatggtcatcccggccaccaagtaccccgtggtcagcgacgccgag
aagcaggccatcgccgtgcagcagcagtacctggacggcgccatcaccaacggcgagcgc
aacaacaaggtcatctccatctggtcgtcggtcaccgaaaaggttgccgacgagatgttc
gacaacatgaagaaggccgacaaggccggcgccatgaacccgatctacatcatggccgac
tccggcgcccgcggttcgaagcagcagattcgccagctctcgggcatgcgcggactgatg
gccaagccgtcgggtgaaatcatcgaaacgcccatcacggcaaacttccgtgaaggactc
acggtgctggagtacttcatctcgacgcatggcgcccgtaagggactggccgacacggcg
ctcaagacggctgactcgggctacctgacccgccgcctggtcgacgtggcgcaggacgtc
atcgtcagcgagcatgactgcggcacgcaggaaggcatctacgtcggtcccatcatcgag
tccggtgagatcatcgagccgctgcgcgaccgcatcattggccgcgtcacgctcgagaag
ctcaaggacttcgagggcaacgtcattaccgacgtcaaccaggagatcaacgaagacatg
gccagcgccattcaggcagcgggcattgagcgcgtcaagattcgctcggtgctcacctgc
gaatcgcgccgcggcatctgcgttctctgctatggccgcaacctcggttcgggccgcctg
gtggaactgggcgaagcctgcggcgtcgtcgcggctcagtcgatcggcgaaccaggcacg
cagctcacgatgcgtaccttccacatcggtggtacggcatcgcgcgtcagcgaccagtcg
cgcgtcgaagccaaaaataatggtatggttcgcttcatcaacctcaccacggttcgctcc
aaacagggcgacctggtggcgatgaaccgctccggctccattgccgtgctcgatgatcgc
ggccgcgaaaaggaacgctaccaggtcgtctacggcgccaagctgaaggtgcaggatggc
cagacggtcaagctgggcgacagcatggtcgagtgggatccgtataccttcgcgattctc
accgagatcggcggcaccatccagttcaaggatctgcaggaaggcatcaccctgcatgag
gaagtcgatgaggtcacgggtctctcgcgtctggtcgtcggcgaatctgccgatgaaaag
cgccagccggccatcctcgtcaagggctccaagggcaacaagcgttacatcatgcccagc
cgcgcccacctcatgatccaggacggcgatgaggtctcgcccggcgacatccttgcgaag
attccgcgcgaaaccacgcgcaccaaggacatcaccggcggtctgccccgcgtcgttgaa
ctctttgaagcccgcaaaccccgcgagaccgctctcatcagcgagatcgacggcgtggtg
cgcttcggcgaaatcagcaagggccagcgcaagatctacgtcacgggcgacaatggcgaa
gagcgcgaatactccctgccgcgtggcattcacgtcaacgtgcaggaaggtgagcgcctc
cgcgccggcgagcctctgatggatggtccgctgaacccgcatgacattctggccgtgctt
ggcgagaaggagctgcaagcctatctcgtcaatgagatccaggaagtctaccgtctgcag
ggcgtggccatctctgacaagcacatcgaagtcatcgtgcgtcagatgctgcgctgggtg
aagatcgaggaagtcggcgacacctcgttcctgcttgaacagcaggtcgacaagttccgc
ttccgcgaagagaacgaccgcaccatcgccaagggtggccgcccggccgtgggccgtccg
ctgctgctcggcatcaccaaggcgtcgctctcgaccgagagcttcatctcggccgccagc
ttccaggagaccacgcgcgtactcaccgaggcgtccatcaacggcgccatcgatggcctg
cgcggcctcaaggagaacgtcatcgtcggccgcctgatccccgctggcacgggcatggag
tactaccgcaacattcagctctcacccgagctcgaagaagcggccgcccgcgtgcagcag
gaagtcattgcgcagcatgaagccgaagagcgcgagcttgaaatgatgcgcgccgaaggc
gaagccgaagaaatggccgcgtccgaataa
DBGET
integrated database retrieval system
