Acidobacterium capsulatum: ACP_3125
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Entry
ACP_3125 CDS
T00868
Name
(GenBank) OB-fold nucleic acid binding domain protein/HD domain protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
aca
Acidobacterium capsulatum
Brite
KEGG Orthology (KO) [BR:
aca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aca03019
]
ACP_3125
Messenger RNA biogenesis [BR:
aca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACP_3125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACO32297
UniProt:
C1F538
LinkDB
All DBs
Position
3613528..3614544
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AA seq
338 aa
AA seq
DB search
MKEPMIADLARYENQSITGFFCASQKSVRNKKDGAPYLALVLADSTGQVEALLWDMTDCR
GEFSQGDVVKVRGQVGRYRDKLQLTLSQIRKAEPNEFTLADFVRATERDVNELWQELESW
VASFTDADLQRLVRAFLNDAEIGGALREAPAAKSMHHAWIGGLLEHIVSLVGLCDRVASY
YPGIHRDLVLTGAMLHDIGKLAELRWGMSFDYTLPGQLLGHITMGVNMVERKIAELGDFP
AEKRVLVEHMILSHHGRYEYGSPKLPMIPEAILLHYLDDLDAKMQTVTNEFARAAASGRD
AAEMTEWVRSMERPLLNTRAYLATAEKPTASEDTDAGT
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagccgatgatcgccgatctcgcgcggtatgagaatcagtcgatcaccggcttt
ttctgtgcctcgcagaagagcgtgcgcaataagaaggatggcgcgccttatctggcgctg
gtgctggccgacagtaccgggcaggttgaggcccttctgtgggacatgaccgattgccgc
ggcgagttttcgcaaggcgacgtggtgaaggttcgcgggcaggtgggccgctatcgcgat
aaattgcaactcacactttcacaaatccgcaaggctgagccgaatgagttcacactggcg
gattttgtgagggcgaccgagcgcgatgtgaacgagctgtggcaggagctggagagctgg
gtggccagctttaccgacgccgatctgcaacggctggtgcgggcctttctgaatgacgcg
gagattggcggcgcgctgcgggaggctccggcagcgaagagcatgcatcatgcgtggatt
ggcgggctgctggagcacattgtgtcgctggtggggctgtgcgaccgcgtggcgagctac
tatcctgggattcatcgcgacctggtgctgacgggcgccatgctgcacgacattggcaag
ctggccgagctgcgctggggcatgagctttgactacacgctgccgggacagttgctgggc
cacatcaccatgggcgtgaacatggtagagcggaagattgcggagctgggggattttccg
gcagagaagcgcgtgctggtggagcacatgattctgagccaccatggccggtatgaatat
gggtcgccgaagctgccgatgattccggaagcgattctgctgcactatctggatgacctc
gatgcgaagatgcagacggtgacgaacgagtttgcgcgcgctgcggcgagtggccgggat
gcggcggagatgaccgaatgggtgcggtcaatggagcggccgctgttgaatacgcgggcc
tatctggccacggcggagaagccgactgcgagcgaggataccgacgccggtacgtga
DBGET
integrated database retrieval system
