Acidobacterium capsulatum: ACP_3419
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Entry
ACP_3419 CDS
T00868
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aca
Acidobacterium capsulatum
Brite
KEGG Orthology (KO) [BR:
aca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aca03032
]
ACP_3419 (topA)
03400 DNA repair and recombination proteins [BR:
aca03400
]
ACP_3419 (topA)
Enzymes [BR:
aca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACP_3419 (topA)
DNA replication proteins [BR:
aca03032
]
Prokaryotic type
DNA Topoisomerases
ACP_3419 (topA)
DNA repair and recombination proteins [BR:
aca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACP_3419 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
ADK_lid
Zn_Ribbon_TF
HTH_ParB
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ACO32840
UniProt:
C1F6V0
LinkDB
All DBs
Position
3965247..3967883
Genome browser
AA seq
878 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGKDFQVEASIGHIKDLPKNKLGVDVEKGTFEPELIVIPG
KEKVVDKLRKLATKVDTIYLAPDPDREGEAIAAHLEDELKAVVKKPEAIRRITFNEITPK
AVTAALDHARSVDRNLVDAQQTRRVLDRIVGYQISPLLWDKVRRGLSAGRVQTVALRLIV
EREQQIKAFKPVEYWTIDAVLKTGGNPQEFTAHFIGIDGERARVETVDAPALPDQKLTDE
VVAQLHKADWSVREVERKERKRNAPAPFTTSKLQQDASRQLGFNVKRTMGVAQRLYEGIE
IGGDAVGLITYMRTDSTRVAPEAIEAVRGYIQKKVGKDYLPAAPNAFKSKKDAQDAHEAI
RPADPNLHPDDIRKYLSDEQYKLYRLIWRRFVASQMMPAIFDQTTVEIAARADRRYDFRV
TGSVMKFDGFLRVYEEVKEKKDADDEALANKLPALNNGDRLALSALKPEQHYTEPPPRYN
EASLVKELEERGIGRPSTYATIINTIQDREYVQKMGGRTGRFIPTEIGTVVTGLLVKNFP
YIFDTKYTARLEEELDDIEDGKERWTDLLNGFYDHFEDELKDAATNMEDIKRMEKPTDQK
CDICGSPLVLKWGKFGSFYACSAYDKKKKDGCTFTKENYEAKPNLAAPSDEAEQEEEYCE
NCGRVMVLRNGPWGPFMACPGYNEDPPCKTVRRLNQKQQQKPPQPLDEKCPKCGEQLVLR
HGQYGEFISCSGYPKCKYIKQNTIGMKCPQCKVGEIVEKKARRGNFFYGCSEYPKCDFTA
NYKPVDRKCPECGSAYLMEKTLKSGVYLVCPNNKKPSAEEETTTKRKKKGDTGEGVSCSF
TERIGDAPSEAPAATATKPAAKPTAKTHGPVVEELAKV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcactcgtgatcgtcgaatcgcccgccaaggcgaaaacgatcaataaatat
ctcggcaaagacttccaggtggaagcctcgattgggcacatcaaagatctgccgaagaac
aagctcggcgtcgatgtcgaaaaaggcacctttgaaccggagctgatcgtcattcccggc
aaggaaaaggttgtggacaagctgcgcaagctggccaccaaggtagacaccatctatctc
gcgcctgaccctgaccgcgaaggcgaggccatcgccgcgcatcttgaggacgagctgaag
gccgtcgtcaaaaagcccgaggccatccgccgcatcaccttcaatgagatcacccccaag
gccgtcaccgccgccctcgatcatgcgcgcagcgtggaccgcaacctggtcgacgcgcag
cagacccgccgcgtgctcgatcgcatcgtgggctaccagatttctcccttgctctgggac
aaagtgcgccgcggcctctccgccggccgcgtgcagaccgtcgccctgcgtctcatcgtc
gagcgcgagcagcagatcaaggccttcaagccggtcgagtactggaccatcgacgccgtg
ctcaagaccggcggcaacccgcaggagttcaccgcgcacttcatcggcatcgatggcgag
cgcgcccgcgtcgagaccgtcgatgcgcccgcgctgcccgatcaaaagcttacggacgaa
gtcgtcgcgcagctccacaaggccgactggtcggtgcgtgaggtcgagcgcaaagagcgc
aaacgcaatgcgcccgcgcccttcaccaccagcaagctgcagcaggacgcctcgcgccag
ctcggcttcaacgtcaagcgcaccatgggcgtcgcgcagcggctctatgaaggtattgaa
atcggcggcgatgccgtcggtctcatcacctatatgcgtaccgactccacccgcgtcgcg
cccgaggccattgaggctgtgcgcggttacattcaaaagaaggtcggcaaggactatctg
cccgccgcgcccaacgccttcaagtccaagaaggatgcgcaggacgcgcacgaagccatc
cgccccgccgatcccaatctgcatccggacgacattcgcaaatatctctccgacgagcag
tacaagctctaccggctcatctggcggcgctttgtcgcctcgcagatgatgcccgccatc
tttgaccagaccaccgttgagattgccgccagggccgaccgccgctacgacttccgcgtg
accggctcggtcatgaagttcgacggcttcctgcgcgtctacgaagaggtcaaggagaag
aaggacgccgacgacgaagcgctggccaacaagctgcccgccctcaacaacggcgacagg
ctcgcgctctccgccctcaagccggagcagcattacaccgagccgcccccgcgctacaac
gaagcctcgctcgtcaaggagctcgaagagcgcggcattggccgcccgtccacctacgcg
accatcatcaacaccattcaggaccgcgaatacgtgcagaagatgggcggccgcaccggc
cgcttcatcccgactgagatcggcaccgtcgtcaccggcctgctcgtcaaaaatttcccc
tacatcttcgacaccaagtacaccgcccggctcgaagaagagctggacgacatcgaagac
ggcaaagagcgctggaccgatctgctcaatggcttctatgaccactttgaggacgagctc
aaggacgcggccaccaacatggaagacatcaagcggatggagaagccgactgaccagaag
tgcgacatctgcggctcgcccctcgtgctcaagtggggcaagttcggctccttctacgcc
tgcagcgcctacgacaaaaagaaaaaggatggctgcaccttcaccaaggagaactacgag
gccaagcccaacctggccgcgccctccgatgaagccgagcaggaagaggagtactgcgaa
aactgcggccgcgtcatggtgctgcgcaacggcccttggggtccgttcatggcctgcccc
ggctacaacgaagatccgccctgcaagaccgtgcgccgcctcaaccagaagcagcagcag
aagcccccccagccgctcgatgagaagtgccccaagtgcggcgagcagcttgtcctgcgc
cacggccagtacggcgagttcatctcctgctccggctatcccaagtgcaaatacatcaag
cagaacaccatcggcatgaagtgcccgcagtgcaaggtgggcgaaattgtcgagaagaag
gcccgccgcggcaacttcttctatggctgctctgagtatcccaagtgcgacttcacggcc
aactacaagcccgtggaccggaagtgccccgagtgcggcagcgcctacctgatggagaag
actctcaagtccggcgtctacctcgtctgtcccaacaacaagaagccttccgctgaggaa
gagaccaccaccaaacgcaagaagaagggcgacaccggcgaaggcgtctcctgcagcttc
accgagcgcatcggcgatgccccgtccgaggcccccgcggccacggccaccaaacccgcc
gccaaacccacagccaagactcacggccccgtcgtcgaggaactggccaaggtctag
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