Acidobacterium capsulatum: ACP_3484
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Entry
ACP_3484 CDS
T00868
Symbol
dnaE3
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aca
Acidobacterium capsulatum
Pathway
aca03030
DNA replication
aca03430
Mismatch repair
aca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACP_3484 (dnaE3)
03430 Mismatch repair
ACP_3484 (dnaE3)
03440 Homologous recombination
ACP_3484 (dnaE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aca03032
]
ACP_3484 (dnaE3)
03400 DNA repair and recombination proteins [BR:
aca03400
]
ACP_3484 (dnaE3)
Enzymes [BR:
aca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACP_3484 (dnaE3)
DNA replication proteins [BR:
aca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACP_3484 (dnaE3)
DNA repair and recombination proteins [BR:
aca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACP_3484 (dnaE3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
CutC
Motif
Other DBs
NCBI-ProteinID:
ACO32268
UniProt:
C1F714
LinkDB
All DBs
Position
4042137..4045658
Genome browser
AA seq
1173 aa
AA seq
DB search
MAEFTHLHLHTDYSLLDGACDVEKLVGHVASIGQTSVAITDHGNIYGAVHFFEAAKKKGI
KPILGCELYICQKEDHRADPQGDDYNHLLVLAESEEGYRNLVRITSEASLHGFYRKPRIS
KKYLAEHAAGLIGFSGCLAGEFCQNLMADNYQAARATAAQYQDIFGRGNFFLEIQDQGLE
LEKKIHADMFRLEKDLDIPLVATNDSHYLCEDDHHAHDVLLCVQTAGSIHDPKRFKFDSD
QFYVKSAAEMERLFPHAPEVVSRTMQFAERCNLKLNKVDNPFPEFAVPPGHTIDSYFEHV
CREGFKKRLDTAIRHLQDRGILRSPISDYEARLEREIGIIKQMKFSGYFLIVWDFIRYAK
DHDIPVGPGRGSAAGSLVGYVMEITDIDPLQNVLLFERFLNPERVSMPDIDIDFCMNRRG
EVIEYVTRKYGREQVAQIITFNTMAAKAAIKDVGRALDMPYGDVDRIAKMIPATIGVTID
QALTDSPQLQEAYEGNTQIRELIDTAKRLEGLVRGAGVHAAGVVIAPRPLTDLVPLSRSK
NDEIVTAYDMKAVEKMGLLKMDFLGLTTLTVIDDCLKMIRKNRGETVDMAKVPLDDQETY
ERVFHRALTSGVFQFESGGMRDVLRRYKPTCVEDLTALNALYRPGPIQGGMIDDFIERKW
GRRKVEYELPPLETILKETLGVIVYQEQVMQIANVLAGYSLGEADLLRRAMGKKNPEEMA
KQRDRFVSGALEREFPKDKIVKIFDLMEQFAGYGFNKSHSAAYALLAYHTAWLKTHYPVE
FMAALLTSEISKPENVVKYIQECREIEIPVEPPDVLFSDADFTPHGKSIRFGLTAIKNVG
RNAIDSILDARGKLAAEGKSFQNFWEFCEKVDLRLMNKRVIESLIKAGALDSFGRRAQLM
ASVDKAIERAQKAQRDEAAGQSGLFGLFDADAPASASPADDLPNVPDWEEALRLQSEKEV
LGFFVSGHPLDRYAEKLRNLPGIIDTATALEMKPAPPTGRRGQSNENEIAIAGMIVGLKV
AKSKRSGDLYAQASLEDATGKIDLICFPRDYERLADSLKMEAPVVVRGALRAEEEAAPKL
AISSIQALDDVKVKLPSNVRIRVQLDRISESTLEELHQLISAVPGPGKMMLNLEKKGEYC
VVMEPEGFTVAADRAFIDQAELLLGRGSVQALD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttacccatctgcacctgcacaccgactactccctcctcgacggcgcctgc
gatgttgaaaagcttgtcggccacgtcgccagtatcgggcaaacctccgtcgccatcacc
gatcacggcaacatctacggggcggtgcatttctttgaagcggctaaaaagaagggcatc
aagcccatcctcggctgtgagctttacatctgccagaaagaggatcaccgcgccgatccg
cagggcgatgactacaaccacctgctggtgctcgccgagagcgaagagggctaccgcaat
ctcgtccgcatcacctctgaggcctcgctgcacggcttttatcgcaagccgcgcatcagc
aaaaaatatcttgccgagcacgccgcgggcctcatcggcttctccggctgcctcgccggt
gaattctgccagaacctcatggccgacaactatcaggccgcccgcgccaccgccgcgcaa
tatcaggacatcttcggacgcggcaacttcttccttgaaattcaggatcagggcctcgaa
ctcgaaaagaagatccacgccgacatgttccggctcgagaaggatctcgacattccgctc
gtcgccaccaatgacagccactatctctgcgaagacgaccaccacgcgcatgacgtgctg
ctgtgcgtgcagacggccgggtccattcatgatcccaagcgcttcaagtttgactctgac
cagttctacgtcaagtccgctgctgaaatggagcgcctctttccgcacgcgcccgaggtc
gtcagccgcaccatgcagtttgccgagcgctgcaacctcaagctcaacaaggtcgataat
cccttcccggaattcgccgttccgcccggccacaccattgacagctactttgagcatgtc
tgccgcgaaggcttcaaaaagcgtctcgacaccgccattcgtcatcttcaggaccgcggc
attctccgcagccccatcagcgattacgaggcccgcttagagcgcgaaatcggcatcatc
aagcagatgaagttctccggctacttcctcatcgtctgggacttcatccgctacgccaag
gaccacgacattcccgtcgggccgggccgtggctccgccgccggctcgctggtcggctac
gtcatggagatcaccgacattgacccgctgcagaacgtgctcctctttgagcgctttctc
aatcccgagcgcgtctccatgcctgatatcgacatcgacttctgcatgaaccgccgcggc
gaggtcattgaatacgtgacccgcaagtatggccgcgagcaggtcgcgcagatcatcact
ttcaacaccatggccgccaaggccgccatcaaagacgtgggccgcgccctcgacatgccc
tacggcgatgtggaccgcatcgccaagatgattccggcgaccatcggcgtcaccatcgat
caggcgctcactgattcgccgcaactgcaggaggcctacgagggcaacacgcagattcgc
gagctgatcgacaccgccaagcgcctcgaaggcctggtgcgcggcgcgggcgtacacgcc
gccggagtggtcatcgcgccgcgcccgctcaccgatctggtgccgctcagccgcagcaaa
aacgacgaaatcgtcaccgcctatgacatgaaggccgtcgaaaagatgggcctgctcaaa
atggacttcctcgggctcacgacgctcaccgtcattgatgactgcctgaagatgatccgc
aaaaatcgcggcgagacggtcgatatggccaaggtgccgctcgacgatcaggagacctac
gagcgcgtcttccatcgcgcgctcacctcgggcgtcttccagtttgagtccggcggcatg
cgcgacgtgctgcgccgctacaagcccacctgcgtcgaagacctcaccgcgctcaacgcg
ctctaccgccccggcccgatccagggcggcatgatcgacgacttcatcgagcgcaagtgg
ggccgccgcaaggtggagtatgaactgccgccgcttgaaaccatcctcaaggagacgctt
ggcgtcattgtctaccaggagcaggtgatgcagatcgccaacgtgctcgccggctactcg
ctcggcgaggccgatctgctgcgccgcgccatgggtaagaaaaatcccgaggagatggcc
aagcagcgcgaccgcttcgtatccggtgcgctcgagcgcgaatttcccaaggacaagatc
gtcaagatctttgacctcatggagcagttcgccggttacggcttcaacaagtcgcactcg
gccgcctacgcgctgctggcctatcacacggcctggctcaagacacactacccggtcgag
ttcatggcggcgctgctcacctctgaaatctcgaagcctgaaaacgtggtcaagtacatt
caggaatgccgcgaaatcgagattcccgtcgagccccccgacgtgctcttcagcgatgcg
gacttcacgccgcatggcaagtccattcgctttggcctcacggccatcaagaacgtgggc
cgcaacgcgattgactccattctcgatgcgcgcggcaaactcgccgccgagggcaagtct
ttccagaacttctgggagttctgcgaaaaagtcgatctgcgcctgatgaacaagcgcgtc
atcgagtcgctcatcaaggccggggcgctcgactcctttggccgccgcgcgcaactgatg
gcctcggtggacaaggccattgagcgcgcgcaaaaggcgcagcgcgatgaggccgccggc
cagagcggactcttcggcctctttgacgccgatgcgccggcctccgcctcgcccgctgac
gacctgcccaacgtgcccgactgggaagaggcgctgcgcctgcaatcggagaaggaagtg
ctcggcttcttcgtctccggccatccgctcgaccgctatgccgagaagctgcgcaacctg
cccggcatcatcgacacggccacggcgctcgagatgaagcccgcgcccccgaccggccgc
cgcggccagtccaatgaaaacgagatcgccatcgccggcatgatcgtcggcctcaaggtg
gccaagtcgaagcgctcgggcgacctctatgcacaggcctcgctcgaagatgcgacgggc
aagatcgacctcatctgcttcccgcgcgattatgagcgcctcgcggactcgctcaagatg
gaagcgcccgtggtggtgcgcggcgcgttgcgtgccgaggaagaggccgcgcccaagctg
gctatctcctccattcaggcgctcgatgacgtcaaggtcaagctgccgtccaacgtgcgc
attcgcgtgcaactggaccgtatcagcgagtccacgctggaggagctgcaccagctcatc
tccgccgtgccggggccgggcaagatgatgctcaaccttgagaagaagggcgaatactgt
gtcgtgatggagccggagggcttcaccgtcgccgctgaccgcgcctttattgatcaggcc
gaactgctgctgggccgaggcagcgtgcaggcgctggactaa
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