Malaciobacter canalis: ACAN_0066
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Entry
ACAN_0066 CDS
T06502
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acaa
Malaciobacter canalis
Pathway
acaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACAN_0066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acaa03019
]
ACAN_0066
03009 Ribosome biogenesis [BR:
acaa03009
]
ACAN_0066
Enzymes [BR:
acaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACAN_0066
Messenger RNA biogenesis [BR:
acaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACAN_0066
Ribosome biogenesis [BR:
acaa03009
]
Prokaryotic type
rRNA helicases
ACAN_0066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QEE31603
LinkDB
All DBs
Position
complement(66589..68052)
Genome browser
AA seq
487 aa
AA seq
DB search
MTFQEFNFKTNLQKSIDDAGFKEPSPIQKDAIPVILEGKDIVGQAHTGTGKTAAFGLPIL
NMMKCNKEVEAVVIVPTRELAMQVSDELFKFGKYLDINTATVYGGQSYSRQLKHISNASI
LVATPGRFLDLLRDKKINIKPNYVILDEADEMLDMGFLDDIKEIFTYMPKQRQTLMFSAT
MPNAIKQLAKTILKEPEFVTVTTSEITNSKIKQAFYVVDEYERDDALIRLYDYKNPDKSI
IFCRTKKEVDRLSTFLVSQGFGAKGLHGDMEQRQREEAINAFKKGRLDVLIATDVAARGL
DVNDVTHVFNYHLPFDSESYVHRIGRTGRAGKEGVAVSIVTPHEFRMLQKIQKSTGGRLE
AKTIPNIKSVKDKKTNSLVEKIKAHEVDDSALLIIENLKEEYDISTIAFKLASMLTSATS
VKGSNTIGKSHKDIEKLIESAVRNSSRNNDKRGGQRRRGPRSGGFKNNRNKSSSSSSSSS
SNRRRRS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttcaagagttcaatttcaaaacaaatttacaaaaatcaattgatgatgcaggc
tttaaagagccaagtccaattcaaaaagatgcaattcctgttattttagaaggtaaagac
atagttggtcaagcccacacaggtacaggaaaaacagcagcatttggactaccaatttta
aatatgatgaaatgtaataaagaagtagaagctgtagttatcgttccaacaagagagctt
gcaatgcaagtttcagatgaattatttaagtttggaaaatatttagatataaatacagca
acagtttatggtggacaatcttatagcagacaattaaagcatatttcaaatgcatcgatt
ttagttgcaacaccaggaagatttttagatttattaagagataaaaaaatcaatattaaa
ccaaattatgtaatccttgatgaagcagatgagatgcttgatatgggatttttagatgat
attaaagagatctttacttatatgccaaagcaaagacaaacattaatgttttctgcaact
atgccaaatgcaattaagcaattagcaaaaacaattttaaaagaaccagagtttgttaca
gttactacaagtgaaataacaaactcaaaaatcaaacaagcattttatgttgttgatgaa
tatgaaagagatgatgctcttattagattatatgattataaaaatcctgataaatcaatc
attttttgtagaacaaaaaaagaagtagatagactttctacatttttagtatctcaaggc
tttggagctaaaggtcttcatggagatatggagcaaagacaaagagaagaagcaattaat
gcttttaaaaaaggtagacttgatgttttaattgcaacagatgtagctgctcgtggactt
gatgtaaacgatgtaactcatgtatttaattatcatttaccttttgattctgaaagctat
gttcatagaattggaagaacaggtcgtgcaggtaaagagggtgttgctgtttctattgta
actccacatgaatttagaatgcttcaaaaaattcaaaaatctacaggtggaagattagaa
gctaagacaattccaaatatcaaatctgtaaaagataaaaaaacaaactctcttgttgaa
aaaatcaaagcacatgaagttgatgattcagcattattaattattgaaaacttaaaagaa
gagtatgatatctctacaattgcatttaaactagcttcaatgcttacaagtgcgacttct
gtaaaaggaagtaatacaattggaaaatctcataaagatattgaaaaactaattgaaagt
gctgttagaaatagcagtagaaataatgataaaagaggcggacaaagaagaaggggtcca
agaagtggaggatttaaaaataatagaaataaatcttctagctcatcttcatcatcatct
tcaaatagaagacgaagaagctaa
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