Malaciobacter canalis: ACAN_1228
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Entry
ACAN_1228 CDS
T06502
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease SbcCD, nuclease subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
acaa
Malaciobacter canalis
Brite
KEGG Orthology (KO) [BR:
acaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acaa03400
]
ACAN_1228 (sbcD)
DNA repair and recombination proteins [BR:
acaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACAN_1228 (sbcD)
Archaeal homologous recombinant proteins
ACAN_1228 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
FBPase_2
DapH_N
DUF5638
Motif
Other DBs
NCBI-ProteinID:
QEE32712
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All DBs
Position
1205080..1206303
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AA seq
407 aa
AA seq
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MKKLRFLHTSDWHLGQNFMGKSRIEEHKAFLFWLLNTIKENNIDVLLVSGDIFDTGTPPN
YALELYYNFLKQLSQVNSLNTTIITAGNHDSVSTLKAPKQLLEALNVHVVVNGDEDENII
IPIKEPLIENAETKAIVCAVPFLRDSVIRQSLAGETVSDKEKLANNGIKAYYEKAYNKAK
EINSNIPIIAMGHLTTVGGRTSESERDIYIGGTLDIGGDYLANMFDYVALGHLHINQRIG
NEHVRYSGSPIPLSFSESKNTQKVNLVTINDSADENVKVEELEVPLTKKLQVIKGDLETI
KKELKAIEDKTTWIEVHIKDDNPMFANTEIRELATKLELIILAVKIEKSEKQLRAKELKA
ISLDELSVQEVFEKRLDLEEIENSEFKEQLSQTFNEVVSNLHESEQI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttgagatttttacacacatcagactggcacttaggtcaaaactttatgggc
aaaagcagaatagaagagcacaaagcttttttgttttggcttttaaatacaataaaagaa
aataatatagatgtattacttgtatcaggagatatttttgatacaggaacaccaccaaac
tatgcacttgaactttactacaattttttaaaacaattatcacaagtaaatagtttaaat
accacaattataacagctggaaatcatgactcagtctccactttaaaagcaccaaagcaa
ctacttgaagcactaaatgtgcatgtggtagtaaatggcgatgaagatgaaaatataatc
atacctataaaagaacctcttatagaaaatgcagagactaaagcaatagtttgtgcagtt
ccttttttaagagatagtgttatcagacaatcacttgctggagaaactgtaagtgacaaa
gaaaaacttgcaaacaatggtatcaaagcttattatgaaaaagcttacaataaagcaaaa
gaaataaactcaaacattccaatcatagctatgggacacttgacaactgtaggcggtcgc
acaagtgaaagtgaaagagatatttatataggtggaacacttgatattggtggggattat
ttagctaacatgtttgactatgtagctttaggacacttgcatataaatcaaagaattgga
aacgaacatgtaagatactcaggctctccaataccacttagttttagtgagtctaaaaat
actcaaaaagtaaatctagttactataaatgatagtgcagatgaaaatgtaaaagtagaa
gagttagaagtaccacttacaaaaaaactacaagttatcaaaggtgatttggaaactatc
aaaaaagagttaaaagctatcgaagataagacaacatggatagaagttcatataaaagat
gacaacccaatgtttgcaaatacagaaataagagaattagctacaaaactggagcttata
attctagcagttaaaatagaaaaaagtgaaaaacaattaagagcaaaagagttaaaagct
ataagcttagatgaactaagtgtgcaagaggtttttgaaaaaagactagacttagaagag
atagaaaatagtgagtttaaagagcagttatcacaaacttttaatgaagtagtttcaaat
cttcatgaaagtgagcaaatctaa
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