Malaciobacter canalis: ACAN_1470
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Entry
ACAN_1470 CDS
T06502
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acaa
Malaciobacter canalis
Pathway
acaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACAN_1470 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acaa03019
]
ACAN_1470 (pnp)
03016 Transfer RNA biogenesis [BR:
acaa03016
]
ACAN_1470 (pnp)
Enzymes [BR:
acaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACAN_1470 (pnp)
Messenger RNA biogenesis [BR:
acaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACAN_1470 (pnp)
Transfer RNA biogenesis [BR:
acaa03016
]
Prokaryotic type
tRNA degradation factors
ACAN_1470 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
S1_2
CTD9
KH_2
Motif
Other DBs
NCBI-ProteinID:
QEE32946
LinkDB
All DBs
Position
complement(1467743..1469923)
Genome browser
AA seq
726 aa
AA seq
DB search
MSTVCEFELNGKDEIFEFNKVAKQANGSVLARLGNAVVLATVVSEFDNPVEEDFTPLTVQ
YVEKTYAAAKLPGGFIKREAKPSEFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADR
DVDLQALALNAASAALYTSNLPIKKSIAGVRIGKINNEYIVNPTADQMQESTLDLYVAGS
KDELLMIEMKSISSEEMVEVDIEAFTKIHKTNEVNEDDLVEAIEVAQNVLKEVNTTYENG
FETVCKEQKSVELVEFTIDEAIINNVRTNYNANVKDAIKKLAKSERAVELKELAKYILEK
EYKENEDINLAQVYEAVSIVKKEIVRKMIVEDKVRADGRGLKDVRPISIETNILPSTHSS
CLFTRGETQALVVGTIAGPKDGQMYEVLTDKSTSMENFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLGKKALEATIDKDFNETIRLVSEILESNGSSSMATVCGGSLALKAAGIPISGL
VAGVAMGMVVEDNNYSVLTDIMGLEDHDGDMDFKVAGTSEGITALQMDIKLGGIELSVLK
EALLQAKEGRLHILNLMEEAAKEIVPSDALPLVEQFAIDPGKIMVVIGKAGSTIKEIIEK
FSVSIDLDRDSGNVKVSGEHKQNVLDACEHIKTISNNATSRKESGKNIDFGKLYTPEEVL
EGKVERITDFGAFISLPKGGEGLLHISKISKERVKNVSDVLSVGEEVKIKVLNVKKDRIE
LASTLL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtgtgtgagtttgaattaaatggaaaagatgaaatatttgaatttaataaa
gtagcaaaacaagctaatggatcagtattagcaagattaggaaatgcagttgtattagca
acagtagtaagtgaatttgataatccagtagaagaggattttacaccattaactgttcag
tatgtagaaaaaacatatgctgctgctaagcttccaggcggatttataaaaagagaagca
aaaccaagtgaatttgaaactttaacttcacgagtaattgatagaagtttaagaccactt
ttcccaaaaggatatgtatatcctacaacaattactgttatggttctaagtgcagataga
gatgttgatttacaagcattggctttaaatgcagctagtgcagctttatatacttcaaac
ttacctattaaaaaatctattgcaggtgtaagaattggaaaaatcaataatgaatatatt
gttaatcctactgctgatcaaatgcaagaatctacactagatttatatgtagctggttct
aaagatgaattactaatgattgaaatgaaatcaatttcaagtgaagagatggttgaagtt
gatattgaagctttcacaaaaattcataaaactaatgaagtaaatgaagatgatcttgta
gaagcaatagaagttgcacaaaatgtattaaaagaagttaatacaacttatgaaaatgga
tttgaaactgtttgtaaagaacaaaaaagtgttgaacttgttgagtttactattgatgag
gcaattatcaataatgtaagaactaactataatgcaaatgtaaaagatgctattaaaaaa
cttgcaaaaagtgaaagagcagtagaattaaaagagcttgcaaaatatatcttggaaaaa
gagtataaagaaaatgaagatataaatcttgctcaagtttatgaagcagtttcaattgta
aaaaaagagattgtaagaaaaatgatcgttgaagataaagtaagagctgatggaagaggg
cttaaagacgtaagacctatttctatagagactaatatacttccttcaactcactcttct
tgcttatttacaagaggtgaaactcaagctttagtagtaggaacaatcgcagggccaaaa
gatggacaaatgtatgaagttttaacagataaatctacatctatggaaaattttatggta
cattataattttccaggtttttcagttggcgaagcaaaacctatgtttggagtaggtaga
agagaattaggtcatggaaatcttggtaaaaaagccttagaagctacaattgataaagat
tttaatgaaacaattagattagtatctgaaatacttgaatcaaatggttcttcttctatg
gctacagtttgtggtggttctttagcacttaaagcagcaggtatcccaatctctggttta
gttgctggtgttgcaatgggaatggtagtagaagataataactattcagttttaactgat
attatgggtcttgaagatcatgatggagatatggattttaaagttgcaggtacaagtgaa
ggtattacagcacttcaaatggatattaaattaggtggaatagaacttagtgtattaaaa
gaagcattacttcaagcaaaagagggaagattacatattttaaatcttatggaagaggct
gcaaaagaaatagttccaagtgatgctttaccattagttgaacaatttgcaattgatcca
ggtaaaataatggttgtaattggtaaagctggttcaactataaaagaaataattgaaaaa
ttctctgtttcaattgacttagatagagatagtggaaatgtaaaagtaagtggagaacac
aaacagaatgtacttgatgcttgtgagcatataaaaacaatttcaaataatgcaacttct
agaaaagaaagtggcaaaaatattgattttggtaagctttatacaccagaagaagtatta
gaaggtaaagttgaaagaataacagactttggtgcatttatatctttaccaaaaggcgga
gaaggtctactacatatatcaaagatctcaaaagagagagttaaaaatgtttcagatgta
ttaagcgtaggagaagaagtaaaaattaaagtattaaatgtgaagaaagatagaatagaa
ttagcttcaacactattgtaa
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