Malaciobacter canalis: ACAN_2431
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Entry
ACAN_2431 CDS
T06502
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
acaa
Malaciobacter canalis
Pathway
acaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACAN_2431 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acaa03021
]
ACAN_2431 (rho)
03019 Messenger RNA biogenesis [BR:
acaa03019
]
ACAN_2431 (rho)
Transcription machinery [BR:
acaa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACAN_2431 (rho)
Messenger RNA biogenesis [BR:
acaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACAN_2431 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
OB_RNB
AAA
AAA_22
SRPRB
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QEE33870
LinkDB
All DBs
Position
complement(2437866..2439209)
Genome browser
AA seq
447 aa
AA seq
DB search
MEESKTQSKTKSPKTNGNSSRKTRTHIPVEGHTIEKLREYPLQDLLKIAKELRVENPQEL
KRQDLMFSILKNQIDAGGFVLFTGILEIKEGGFGFLRAIDGNFSDTSSDSYVSATQIRKF
ALRTGDIVTGQVRPPNKESEKYYALLKIEAINYLPVNESKNRPLFDNLTPLYSTDKFKFE
YNSNKMTGRILDLFAPMGRGQRSLIVAPPKTGKTELLKELAHGITKNHPETSLMVLLIDE
RPEEVTDMQRSVKGEVYSSTFDLPAHNHVRVAEIVIEKAKRLVEMKKDVVILLDSITRLA
RAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIISTALIETGSKMDEVI
FEEFKGTGNSEVVLSRNASNRRVYPALDITKSGTRKEELLLTPEVLQRTWILRNAISQMD
EVEALKFLYSKMQRTKDNEEFFNSMNE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcaaaaactcaatctaaaacaaaaagtcccaaaacaaatgggaattctagt
agaaaaactagaactcatattcctgttgaagggcatacaattgaaaaattaagagaatat
cctttacaggaccttcttaaaattgcaaaagagttaagggtagaaaacccacaagagctt
aaaagacaagatttaatgttctcgattttaaaaaatcaaatcgatgcaggaggatttgtc
ttattcacaggtattttagaaataaaagagggtggatttggttttttaagagcaattgat
ggtaacttctctgatacttcaagtgattcttatgtgtcagctactcaaattagaaagttt
gcattaagaactggtgatatcgtaactggacaagtaagacctccaaacaaagagagtgaa
aaatattatgctttattaaaaattgaagctataaactacttacctgtaaatgaatctaaa
aatagaccgctatttgataacttaactcctttatactcaacagataaatttaaatttgaa
tataattcaaataaaatgacaggtagaatacttgatctatttgctccaatgggtagagga
caaagaagtttaattgttgcacctccaaaaactggtaaaacagagttattaaaagagtta
gctcacggtattacaaaaaatcatcctgaaacaagcttaatggttcttttaattgatgaa
agacctgaagaggtaacggatatgcaaagaagtgtaaagggtgaagtttattcttcaact
tttgatttacctgctcataatcatgtaagagttgcagagattgtaattgaaaaagcaaaa
agacttgtagagatgaaaaaagatgttgttattttacttgattctattacaagacttgca
cgtgcttataatactgtaacacctagttctggtaaagtactttcaggtggtgttgatgca
aatgcactacacaaaccaaaaagattctttggggctgctagaaatatagaagagggtggt
tctttaactattatttcaactgcacttattgaaactggttcaaaaatggatgaagtaatt
tttgaagagtttaaaggaactggtaatagtgaagttgtattaagtagaaatgcttcaaat
agaagagtttatccagctttagatattactaaatctggaactagaaaagaggagttatta
ttaactcctgaagttcttcaaagaacatggatattaagaaatgcaatttcacaaatggat
gaagttgaagctttaaaattcttatattcaaaaatgcaaagaacaaaagataacgaagag
ttttttaactctatgaatgagtag
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