Amycolatopsis carbonis: QRX50_02640
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Entry
QRX50_02640 CDS
T10496
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
acab Amycolatopsis carbonis
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WIX79719
UniProt:
A0A9Y2MY55
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Position
559040..561298
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AA seq
752 aa
AA seq
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MSTVPADLSGKSDAELIAEVRSGNIASYGPLYERHSGAAHNLARQLARSSSEADDLVSEA
FSKVLETLRGGKGPDTAFRAYLLTALRHTAYDKTRRDRRVDLNEDMSDAGGAIGEALTVP
FSDTAVAGLERTLAAKAFARLPERWQAVLWHTEIEQQSPAEVAPLLGLTANGVSALAYRA
REGLRQAYLQVHLQETAAERCHATAERLGAWTRDGLSKRERAQVESHLDECEDCRGLAAE
LADVNGGLRAIIAPIVLGGAALGYLATIGAAKAGAATAGAAVGAGAAAAGGAKAGAAAAA
SAPRQFVGVAASGAAIVAAVAVALAAAGSPQEIPVAAQVPPPAAAPAVPPPAKPAPPAPP
APPAPPQAPPPAVPAPPPVQPPPAAPPAAPPPPATPAAAKMSATTPSGDLELQPGAGPVN
LPITVRNDGGSPSDPVQVALNLPPGVSAVPAGGGGGAVSGFSRQADTPATTQLSVDCPGG
TGTVTCKTGSGLQPGQTAVLTFRLQADDSAQGGTVTGSVTAGATIKVAVSVKVTVKSPPD
LLALQADTDGLSAFPWTRNPLVYVRVRNTGDTTKPVTVTFDHSLYQSWSLSSFPCDSTDT
GATCTTRGALAPGQHVNLWVRLKGRPAHNAAVTVTATLGKAAQQAKVSFGCWLGICDVPY
PTTGVPPTPSSSSTTTSETPESSSLSKKPPHRKPTPSSTPPAKPTDPVTTTSPSSPATTT
SAPPTPGSGNSGKPGETPPSIEPRGFFDWLRG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgttcccgccgatctgtccggtaagagcgacgccgagctgatcgccgaggtc
cgctcagggaacatcgccagctacgggcccctttacgaacggcacagcggcgccgcccac
aacctcgctcgccagctcgcgcggtcgagctccgaggccgacgacctcgtgtccgaagcg
ttctcgaaggtcctcgagacgctgcgcggcggcaaaggtccggacaccgcgttccgcgcg
tacctcctcaccgcactgcgccacaccgcgtacgacaagacccgccgcgaccgccgcgtc
gacctcaacgaggacatgagcgacgccggcggcgccatcggcgaggcactcaccgtgccg
ttctccgacaccgccgtggccgggctcgagcgcacgctggccgcgaaggcgttcgcgcgg
ctgccggaacgctggcaggccgtgctgtggcacaccgagatcgagcagcagagcccggcc
gaggtcgcgccgctgctgggcctgaccgccaacggcgtgtccgccctcgcctaccgcgcc
cgcgagggcctgcgccaggcgtacctgcaggtccacctgcaggaaaccgccgccgaacgc
tgtcacgccacggccgagcggctcggcgcgtggacgcgcgacggactgtccaaacgcgag
cgggcccaggtggagagccacctcgacgagtgcgaggactgccgcggcctggccgccgag
ctcgccgacgtcaacggtggcctgcgcgcgatcatcgccccgatcgtgctgggcggcgcc
gcgctgggttacctcgcgacgatcggcgccgcgaaggcgggagcggccacggcgggtgcc
gccgtcggtgccggcgctgccgcggcgggcggcgccaaggccggcgccgcggccgccgct
tccgcgccccggcagttcgtgggcgtcgcggcttcgggcgccgccatcgtggcggcggtg
gcggtcgcactggccgcggccggctcaccgcaggagatccccgtggccgcgcaggtcccg
ccgccggccgccgcgcccgcggtgccgccgccggccaagcccgcgccgcccgcaccgccg
gccccacccgcacctccgcaggcgccgccgcccgcggtccccgcgcccccacccgtccag
ccgccgcccgccgcgccacctgcggctccgcctccgccggcgacacccgcggcggcgaag
atgtcggcgaccactccttcgggtgacctcgaactccagcccggcgccgggcccgtaaac
ctgccgatcacggtccgcaacgacggcggcagcccgtccgatcccgtccaggtcgcgttg
aacctgccgcccggtgtgtccgccgtgcccgcgggtggcggcggcggtgccgtgagcggg
ttttcgcgccaggccgacacgccggcgacgacccagctcagcgtcgactgccccggcggc
accggcaccgtgacgtgcaaaacgggctccggcctgcagcctggccagacggccgtgctc
accttccgcctgcaagccgacgactccgcgcagggcggcaccgtcacgggttcggtcacg
gcgggcgcgacgatcaaggtcgccgtgagcgtgaaggtcacggtgaagtcgccgcccgac
ctgctcgcgctgcaggccgacaccgacgggctctcggcgttcccgtggacgcgcaacccg
ctcgtctacgtccgcgtccgcaacaccggcgacaccacgaagccggtcacggtcacgttc
gaccactcgctgtaccagtcgtggagcctcagcagtttcccgtgcgactccaccgacacg
ggcgccacgtgcaccacgcgcggcgcgctcgcgccgggccagcacgtgaacctgtgggtg
cggctcaagggccgcccggcgcacaacgcggccgtgaccgtgaccgcgacgctcggcaag
gcggcgcagcaagccaaggtgtcgttcggctgctggctcgggatctgcgacgtgccgtac
ccgacgaccggagtcccgccgacgccgtcttcttcctcgacgacgacctcggaaaccccc
gaatcgtccagcttgtcgaagaagccgccgcaccggaagccgacgccgtcgagcaccccg
ccggcgaagccgacggacccggtcaccaccacctcgccgagcagtccggcgaccaccacg
agcgcgcccccgacaccgggaagcggcaactccggcaaacccggcgagaccccgccgtcg
atcgagccccgcggctttttcgactggttgagggggtag
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