Amycolatopsis carbonis: QRX50_12320
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Entry
QRX50_12320 CDS
T10496
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
acab Amycolatopsis carbonis
Pathway
acab03420
Nucleotide excision repair
Brite
Enzymes [BR:
acab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QRX50_12320
Transcription machinery [BR:
acab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QRX50_12320
DNA repair and recombination proteins [BR:
acab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QRX50_12320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WIX81482
UniProt:
A0A9Y2IKJ5
LinkDB
All DBs
Position
complement(2526474..2528120)
Genome browser
AA seq
548 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDNPQANDARIAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALTTYSRFPVPQPLLIDVVDVMGRFGRLQITNHPAHGLVMSTTDRAVLEEVS
RHKKISPMLGARVDEDTVLVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIDLDEQDW
HLRDYQRQAAEAFWAGGSGVVVLPCGAGKTLVGAAAMAHAKATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRHLELFDSRDWGLVVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAP
AECTEVRVTLTDAERLAYATSEPDERYKLAATAMTKLPVIKSIVERHAGEPTLVIGAYLD
QLEMLGAELDAPVIQGSTRNKEREELFDRFRRGELRTLVVSKVANFSIDLPEASVAIQIS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSIVSRDTVDTEYAAHRQRFLAEQGYAYHIVD
AEDLRRPL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatggccccctgatcgtccagtccgacaagaccgtgctgctcgaggtcgacaac
cctcaggccaacgacgcgcggatcgccatcgcgccgttcgccgagctggaacgcgcgccc
gagcacgtgcacacgtaccgcatcacgcccctggcgttgtggaacgcgcgcgccgccggg
cacgacgcggagcaggtggtggacgcgctcaccacgtactcgcgcttccccgtgccgcag
ccgctgctgatcgacgtggtcgacgtgatgggccgcttcgggcggctgcagatcaccaac
caccccgcccacggcctggtgatgtcgaccacggaccgcgcggtgctggaagaggtgtcg
cggcacaagaagatcagcccgatgctcggcgcgcgcgtcgacgaggacacggtgctcgtg
cacccgtccgaacgcgggcggctcaagcaggcgctgctgaaggtcggctggcccgcggag
gacctcgcgggctacgtcgacggcgaagcgcacccgattgacctcgacgagcaggactgg
cacctgcgcgactaccagcgccaggcggcggaggcgttctgggccggcggctcgggtgtc
gtggttctgccttgtggcgcgggcaaaacactcgtgggcgcggcggccatggcgcacgcc
aaggcgaccacgctgatcctggtgaccaacaccgtcgcgggccggcagtggaagcgcgaa
ctggtggcgcgcacgtcgctgaccgaggacgagatcggcgagtactcgggcgagaagaag
gagatccgcccggtcacgatcgcgacgtaccaggtcgtgacgcgcaagaccaagggcgag
taccggcacctggagctgttcgactcgcgcgactgggggctcgtcgtgtacgacgaggtc
cacctgctgccggcgcccgtgttccggatgacggcggatctgcagtcccggcgtcgcctg
ggcttgacggcgaccctggtgcgcgaggacggccgcgagggcgacgtgttctccctgatc
gggcccaagcggtacgacgttccctggcgggacatcgaggcgcagggctggatcgcgccc
gcggagtgcaccgaggtccgcgtgaccctgacggacgccgagcgcctcgcgtacgcgact
tcggagccggacgagcggtacaagctcgcggcgacggcgatgacgaagctgcccgtgatc
aagtccattgtggagcgtcatgccggcgagcccaccttggtgatcggcgcgtacctcgac
cagctggaaatgctgggcgcggagctggacgcgcccgtgatccaggggtcgacgcgcaac
aaggagcgggaggagctgttcgaccgcttccgccgcggcgagctgcggacgctggtggtg
tcgaaggtggcgaacttctccatcgacctgccggaagcgtcggtggccatccagatctcg
ggcacgttcggctcccgccaggaagaggcgcagcggctgggccggctgctgcgccccaag
ggcgacgggcggcaggcgcacttctattcgatcgtgtcccgggacaccgtggacacggag
tacgccgcgcaccggcagcggttcctggcggagcaggggtacgcgtaccacatcgtcgac
gcggaggacctgcgccggccgctgtag
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