Amycolatopsis carbonis: QRX50_17930
Help
Entry
QRX50_17930 CDS
T10496
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
acab Amycolatopsis carbonis
Pathway
acab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QRX50_17930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acab03000
]
QRX50_17930
03400 DNA repair and recombination proteins [BR:
acab03400
]
QRX50_17930
Enzymes [BR:
acab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
QRX50_17930
Transcription factors [BR:
acab03000
]
Prokaryotic type
Helix-turn-helix
AraC family
QRX50_17930
DNA repair and recombination proteins [BR:
acab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QRX50_17930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
DUF6918
DUF6233
DUF7437
Motif
Other DBs
NCBI-ProteinID:
WIX83957
UniProt:
A0A9Y2IQ77
LinkDB
All DBs
Position
complement(3638703..3640166)
Genome browser
AA seq
487 aa
AA seq
DB search
MYEDIERCVRAVQSKDARFDGWFFTAVVTTGIYCRPSCPVVPPKVENMRFYGSAAAAQTA
GFRACKRCRPDVTPGSPLWNERADVVARAMRLIADGVVDREGVSGLAARLGYSVRQVERQ
VHAELGAGPLALARAQRAETARLLVETTEMPMGDIAHAAGFSSIRTFNDTVRQVFALTPS
ELRSRASGAPSSPGALSLRLPFRAPLCPDNLFGHLAATAVPGVEEWRDGAYRRTLRLPHG
HGIVSLAPTPDHIACRLGLTDLRDLSAAISRCRRLLDLDADPVAVDAQLSSDPALAPLVA
KNPGRRVPRTTDPEEFAVRAVLGQQVSTAAARTHAARLVTAHGTPVDDREGGLGFLFPTP
ADLVGLDPSSLAMPQSRRRTLLGLVAALAAGDLDLSPGGDWARARAELSALPGFGPWTVE
TIAMRALGDPDAFVPADLGVKLAAAALDLPTSPSALTRHAAAWQPWRAYAVQYLWATGDH
PINYLPA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgaggacatcgaacgctgcgtgcgcgcggtgcagtcgaaggacgcccggttcgac
gggtggttcttcacggccgtcgtcaccaccggtatctactgccgcccgagctgcccggtc
gtgccgccgaaggtcgagaacatgcgtttttacggcagcgcggcggcggcgcagacggcc
gggttccgcgcgtgcaagcgttgccggcccgacgtcacaccgggatcgccgctgtggaac
gagcgcgccgacgtggtcgcccgcgccatgcggctgatcgccgacggagtggtcgaccgc
gagggcgtaagcgggctcgcggcgcggctcgggtacagcgtgcggcaggtcgagcggcag
gtccacgccgagctgggcgccgggccgctggcgctcgcgcgggcccagcgcgcggaaacc
gcgcggctgctggtcgagaccaccgagatgccgatgggcgacatcgcgcacgccgcgggg
ttctcgagcatccggacgttcaacgacaccgtacgccaggtgttcgcccttacaccgagc
gagctgcgctcgcgggcgtccggcgcgccgtcttcgccgggggcgctgtcactgcgcctg
ccgttccgcgcgccgctgtgccccgacaacctcttcggccacctggcggccacggccgtg
ccgggcgtcgaggaatggcgcgacggcgcgtaccggcgcaccctgcgcctgccgcacggc
cacggcatcgtttcgctggcgccgacgcccgaccacatcgcgtgccgcctcggcctcacc
gacctgcgcgacctgtcggccgccatcagccgctgccggcgcctgctggacctcgacgcg
gatcccgtcgcggtcgacgcgcagctctcctcggatccggcgctggcccccttggtcgcg
aagaaccccgggcgccgggtgccgcgcacgacggatcccgaggagttcgccgtccgggcc
gtactggggcagcaggtgtcgaccgccgcggcccgcacgcacgccgcccgccttgtcacg
gcccatggcacgcccgtcgacgatcgcgagggcggcctgggtttcctcttccccactccg
gccgatctggtgggcctggatccttcgtcgctcgcgatgccgcagtctcgccgtcggacg
ctgctgggcctcgtcgccgccctcgctgcgggcgacctcgacctttcgccgggcggcgac
tgggctcgcgctcgcgccgagctgtcggcactgccggggttcgggccgtggacggtggag
accatcgcgatgcgggcgctgggggatccggatgcgttcgtacctgcggatctgggggtg
aagctggccgctgcggcgctggatctgccgacctcgccttcggccctgacccggcatgcg
gcggcctggcaaccgtggcgggcctacgcggtgcagtacctgtgggcgacgggtgatcat
ccgatcaactatctgccggcgtag
DBGET
integrated database retrieval system
