Amycolatopsis carbonis: QRX50_18835
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Entry
QRX50_18835 CDS
T10496
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acab Amycolatopsis carbonis
Pathway
acab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QRX50_18835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acab03019
]
QRX50_18835
03400 DNA repair and recombination proteins [BR:
acab03400
]
QRX50_18835
Enzymes [BR:
acab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QRX50_18835
Messenger RNA biogenesis [BR:
acab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QRX50_18835
DNA repair and recombination proteins [BR:
acab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QRX50_18835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
MarR_2
HTH_IclR
PcrA_UvrD_tudor
TrmB
AAA_30
Rrf2
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WIX82682
UniProt:
A0A9Y2IMS1
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All DBs
Position
3806753..3808396
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AA seq
547 aa
AA seq
DB search
MTSSRPNPTDVAGALFDFALRPSQVQAADAVAAGQDTLAVLPTGSGKSAIYQVAGLARGG
LTLVISPLIALQRDQLRSIAGRPYGDRTINAELLNSSQKVHERRETLARLEKGELDFVFL
GPEQLSNAETRAAITNVTLFVVDEAHLVSEWGQEFRPEYLRLTDAIAEFGRPPVLALTAT
ASPPVQADITRRLGMRDAQLVVADFDRPNISLSMRPTQPSKPEARAVDDRCVDVLIQHDT
PALVYALTHARCEALADRLRLDAFRSAPYHGGMTAAARAQVQDDFFAGKLDVVVATSAFG
MGIDKPDIRTVVHAGVPASIDDYYQEIGRAGRDGEPAVAVLVHDPRTIRIPRLLAARTHL
GEETVHLVVDAVENSPRQATLTELTASAGVPAHAVERVVNELVELGFVGVTGSGHHRVVE
CEQELTPPAELADQLVDLDRRRQAVLTSRIEAARGYAESTRCRRAELLAYFGENYTPPCE
NCDNDRAAHTTEHQRADVSGGAPVHHRLWGDGQLLSQDEHELLVYFPSVGYKHLTASTIS
SGILQPR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctcacgtccgaatcccaccgacgtcgcgggtgcgttgttcgatttcgcactt
cggccctcacaggtgcaggcggccgacgcggtcgcggcggggcaggacacgttggccgtg
ctgcccacgggcagcgggaaaagcgccatctaccaggtcgccggcctcgcccgcggtggg
ttgacgctggtgatttcgccgctcatcgcgttgcagcgcgaccagctccggtccatcgcg
ggacgcccgtacggcgaccgcaccatcaacgccgagctcctcaactccagccagaaggtc
cacgaacgccgggagacgctggcgcggctggagaagggcgagctggacttcgtcttcctg
ggccccgagcagctctcgaacgccgagacgcgtgcggcgatcaccaatgtcacgttgttc
gtggtggatgaagcacatttggtgagcgaatggggacaggagttccgccccgagtacctg
cggctcaccgacgcgatcgccgagttcggccggccgccggtcctcgcgctcacggctacg
gcgtcgccgcccgtgcaggcggacatcacgcgccggctggggatgcgcgacgcgcagctg
gtggtcgccgacttcgaccggcccaacatttcgctctcgatgcgcccgacgcagcccagc
aaaccggaggcgcgggccgtcgacgaccggtgcgtcgacgtcctcatccagcacgacacc
ccggcactcgtctacgcgctcacccatgcccgctgcgaggccctcgccgaccgcctgcgc
ctcgacgccttccgctcggcgccgtaccacggcggcatgacggctgccgcccgcgcgcag
gtgcaggacgacttcttcgcggggaagctggacgtcgtcgtggccacgagcgcgttcggg
atggggatcgacaagcccgacatccgcacggtcgtgcacgccggtgtgcccgcgagcatc
gacgattactaccaggagatcggccgcgccggccgggacggggagccggccgtggcagtc
ctcgtgcacgacccgcggaccatccgcatcccgcgcctgctcgccgcccgcacccatctc
ggcgaggagaccgtgcacctggtcgtcgacgcggtcgagaactcgccccggcaggcgacg
ctcaccgaactgaccgccagcgccggggtgcccgcccacgccgtcgagcgggtggtcaac
gagctggtggagctgggtttcgtgggcgtcacgggatccggccaccaccgcgtggtggaa
tgcgaacaggaacttacaccaccagccgagctcgccgaccagctcgtggacctcgaccgg
cgccggcaggccgtgctcaccagccggatcgaggccgctcgcgggtacgccgaaagcacg
cggtgtcgccgtgcggaacttctcgcctacttcggtgagaactacacaccgccctgtgaa
aactgcgacaacgaccgtgcggcgcacaccaccgaacaccagcgcgccgacgtctccggc
ggtgctcccgtgcaccaccgcctgtggggagacgggcaactgttgtcccaggatgaacac
gagttgctcgtttactttcccagcgtgggctacaagcacctgaccgcgtcgacgatctcg
tccggcatcctccagccgcgctga
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