Amycolatopsis carbonis: QRX50_20260
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Entry
QRX50_20260 CDS
T10496
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
acab Amycolatopsis carbonis
Pathway
acab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QRX50_20260 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acab03019
]
QRX50_20260 (orn)
03009 Ribosome biogenesis [BR:
acab03009
]
QRX50_20260 (orn)
Messenger RNA biogenesis [BR:
acab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QRX50_20260 (orn)
Ribosome biogenesis [BR:
acab03009
]
Eukaryotic type
Pre-60S particles
RNases
QRX50_20260 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WIX82929
UniProt:
A0A9Y2N1C9
LinkDB
All DBs
Position
complement(4074378..4074986)
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AA seq
202 aa
AA seq
DB search
MTDHLVWIDCEMTGLDLGKDALIEIAALVTDADLNVLGEGVDIVIHTDDTTLDGMPQVVH
DMHAKSGLTEEVRASAVTLAEAEQRVLDYIREHVPDPGTAPLAGNSIATDRGFISRDMPA
LDSHLHYRMVDVSSVKELVRRWYPRIYYAKPEKGLAHRALADIKESIGELDYYRNVAFVP
QPGPTSEQAKAAAAEVQERHRS
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccacctagtctggatcgactgcgagatgacggggctcgacctcggcaaagac
gcgttgatcgaaatagccgccctcgtgaccgacgccgacctcaacgtcctcggcgaggga
gtcgacatcgtcatccacaccgacgacaccacgctcgacggcatgccgcaggtggtccac
gacatgcacgccaagtccgggctcaccgaagaagtccgcgcctccgcggtgacgctcgcc
gaagccgagcagcgcgtgctcgactacatccgcgagcacgtccccgaccccggcacggcc
cccctggcgggcaactccatcgccaccgaccgcggcttcatctcccgcgacatgccggcc
ctcgacagccacctgcactaccgcatggtcgacgtgtcgtcggtcaaggaactggtccgg
cgctggtacccgcggatctactacgcaaagccggagaagggcctcgcccaccgcgcgctc
gccgacatcaaggaatccatcggcgaactcgactactaccgcaacgtcgccttcgtcccc
caacccgggccgaccagcgaacaagccaaagccgcggccgccgaagtgcaggaacgccac
cgaagctga
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