Amycolatopsis carbonis: QRX50_25180
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Entry
QRX50_25180 CDS
T10496
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acab Amycolatopsis carbonis
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acab03016
]
QRX50_25180 (truB)
Enzymes [BR:
acab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QRX50_25180 (truB)
Transfer RNA biogenesis [BR:
acab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QRX50_25180 (truB)
Prokaryotic type
QRX50_25180 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PUA
PseudoU_synth_2
LPP
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WIX74871
UniProt:
A0A9Y2I9F0
LinkDB
All DBs
Position
5067421..5068335
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AA seq
304 aa
AA seq
DB search
MSRPKEPRRPAPPPGLLIVDKPAGMTSHDVVARARRIMGTRKIGHAGTLDPMATGVLVLG
IERATKLLGHLALDRKTYLATLSLGSSTTTDDAEGEVLTEGDPALLAKITDEQLATGVAE
LTGDIQQVPSAVSAVKIDGKRAYARVRAGEDVVLPPRPVTVYRFDVLATRREDDRIELDA
VVECSSGTYVRALARDLGAGLGVGGHLLALRRTTVGPFTLARARTLDQLEETPELSLDLD
AAVAAAFPRRDVDAAEAQAVRHGRAIPAAGIDGTYGLFAPDGRVLALAADTEGVARSVVV
LLPA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcgcccgaaagaaccgcgccgccccgctccgccgcccggtctgctcatcgtcgac
aaaccggccggaatgacgtcgcacgacgtcgtggcgagggctcgccggatcatgggcacc
cgcaagatcggccacgccggcacgctcgacccgatggccaccggcgtgctggtgctcggc
atcgagcgcgccaccaagctgctgggccacctggcgctcgaccgcaagacctacctcgcg
acgctgtcgctgggcagctccaccaccaccgacgacgccgagggcgaggtgctcaccgag
ggtgacccggcgttgctcgcgaagatcacggacgagcagctcgccaccggcgtcgccgag
ctcaccggcgacatccagcaggtgcccagcgccgtcagcgccgtgaagatcgacggcaag
cgggcctacgcgcgggtgcgcgcgggcgaagacgtggtgctcccgccgcggcccgtcacc
gtctaccgcttcgacgtgctggccacgcgccgcgaggacgaccggatcgagctcgacgcc
gtggtcgagtgctcgtcgggcacctacgtgcgcgcgctggcccgcgacctcggcgccggg
ctcggcgtcggcgggcacctgcttgccttgcggcgcaccacggtcgggcccttcaccctc
gcccgggcgcgcacgctcgaccagctcgaggagacgcccgagctgtcgctggacctcgac
gccgccgtcgccgcggccttccctcgccgcgacgtcgacgccgccgaagcgcaggccgtg
cgccacggccgggccatcccggcggccggcatcgacgggacctacggcctcttcgcgccc
gacggccgggtgctcgccctggccgccgacaccgagggtgtggcccggtcggtggtggtc
ctgctgcccgcatag
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