Amycolatopsis carbonis: QRX50_30335
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Entry
QRX50_30335 CDS
T10496
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
acab Amycolatopsis carbonis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
EspA_EspE
T7SS_signal
OCRE
WXG100_2
Rv0964c
DUF4585
HTH_10
PPE
WXG100
Motif
Other DBs
NCBI-ProteinID:
WIX75766
UniProt:
A0A9Y2IAM4
LinkDB
All DBs
Position
6130155..6135698
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AA seq
1847 aa
AA seq
DB search
MSNPLIAQTQDSTKAYSGISLLESANGLAEGIESGDWAATAMGAVGTGLEMLSVAMDPFG
AALAAGVGWLLEHVGPLKEALNGLTGNADQIKAQSETLGNVSKELGAVASDLIDAVNADL
QSWTGSAADAYRARAQDLSNSLQAAAKGCEGAAAGVQKGGEIVAAVRTLVRDIISQLIGH
MISWALQVIATLGIGLTWVIEEVVENVAKTATQIAKLVTAVVKALKALAPMLKNTGELFA
DVGKGLKGIKGGKVAAPPKTKALSGTPEPPPVKSTGGAGGGGTKASGYEGTPKDYTPPPG
SKGADSGGTKASGYEGNPKDYTPPAGKAGGADEGTTASGYSGGGSKDYTPPAGKAGGADE
GTTASGYSGGGSKDYTPPAGKAGGADEGTKASGYTGGGSKDSAPPAGSKAGDDATHASGS
PDGTGAAGEVPTSGGGSRGLPKDDSTGTSGTKSLKDSNADPHENSTPVKDRIDCGDPIDV
ATGWMMLTQTDLTVPGALPLEVSRTHLSSYRAGRFFGPTWASTVDQRIEAGDDGLHVALA
DGSIQTYPVPADDPVLPVAGPARSLSRFEGGYLVTDDDQAQSLFFTDNGSGVCPLAMIGD
GDGNRIEVVRDEIGVPVAMVHSSGTSVLFDSTDGRITALRAQDGTVLAAYSYDARGRLIE
IVDQAGTPTRFTYDADGRIIRWDDVNGRWYGYGFDSAGRVVRATGTDGYLDCAIEYDRER
LVTTVTDSLGAVRRFHLDDRLDVIAETDPLGHTTTFRYDEHGRLLTRTDPLGRQTRWERD
EAGRVTAVTAPDGTRSLTEYNELGRPSAAIGPDGATWRYEYDTRGKAAAIVDPLGARTTF
GYDERGNLALITDALGGATHIESDPAGRPLTVVDEEGAVVRYTYDDLGRTTSVTDQVGAV
TQYRWAGGDEPAEEIGPDGATWQWQDAAVGNTQDRSDPRGNRTRTEYAQFDLPVAEIGPD
GQRIEYAYDTELRLVSMTNEQGLVWRYDYDAAGNLVRETDFNGRTLTYRYDAAGDVVART
NGAGETTQLQRDAMGRVVRRTTGGDVATFAYDAAGRLVVARNADAEVTFAYDALGRVVTE
TVDGRPVRSEYDALGRRGLRRTPSGAESRFDYGPAGTVAALHAGSRTIRFDHDLAGRERV
RRLGAAELHQSWDSGDRLTAQSVNTGARTTQHREYGYLADGYLSSVADALSGPRTFDVDR
TGRVRSVAGHGWQESYAYHPSGAIAQAQTPSAPSAGPREYRGTLLASAGALRFAHDPEGR
TTVRATGPGGPQWQFRWNAESRLTTVVTPNGEHWRYRYDALGRRVAKQRLAADGRITEQV
QFAWDGATLAEQVHSGPGRPQIATVWEFSPGTGRALAQTERVLGTADERFHAIVTDLVGA
PSELVDERGEVAWHRQATLWGKVLSAPGGATTPLRFPGQYHDAETGLHYNVNRYYDPETG
RYLSHDPLGLDPGPDSQAYVLNPTALADPLGLMPKATPCAAAKKKAAQQNQSPYGKKPNP
PRVQPDGTYGKTAAEVKRLNHKYFDDISKDPSWPHSKKQLSGDHTHQSEHPIGYHALAPD
FKRGASADAKRIEDDAPAYQESYQAHRDNIGTGNRVEQDGSGLDARGYRESLDNAVSGGR
PSDAVQLNQLTYANQHMKPVLEKNPNWKSYDDTPDEPRFNQKTEPNPAYVDKGTTPNEPK
RLPVMENAPERDSFRPTAGTTQGKIADDSYHRMVDHMRDRPLEYSDRQGGFAHTPGPDRA
DVAEMHLARDTARSGQYPTRAEEDAAVERTFDHRTPADEARAKQYDDAHDAAEANRTDRP
APGQKAEDYAAQRQEEAMAQRLGISRQELRDRLERARENQENAMDVD
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacccattgatcgcgcagacgcaggattcgacgaaggcgtattcgggcatttcg
ctgttggagtcggcgaatggtcttgccgagggaatcgagtccggtgactgggcggcgacc
gcgatgggcgccgtcggcactggactggaaatgctttcggtggcgatggacccgttcggc
gcggctctggcggccggggtggggtggttgctggagcacgtggggccgttgaaggaagct
ctcaatgggctgacgggtaacgcggatcagatcaaggcgcagtcggagacgttgggaaac
gtttcgaaagagctgggtgcggtcgcctcagatttgatcgacgcggtgaacgcggatctg
cagtcctggacaggatcggcggccgatgcgtaccgcgcgcgcgcccaggacttgagtaat
tcattgcaggcggcggcgaaggggtgcgagggcgcggccgcgggggtgcagaagggcggc
gagatcgtggccgccgtgcggacgctggtgcgcgacatcatctcgcagctgatcgggcac
atgatcagctgggcgctgcaggtgatcgcgaccctcgggatcgggctgacctgggtgatc
gaagaggtggtcgagaacgtcgcgaagaccgccactcagatcgccaagctggtcacggcc
gtggtgaaggcgctcaaggcgctggctccgatgctgaagaacaccggtgagctgttcgcg
gacgtgggcaagggcctcaaggggatcaagggcgggaaggtcgcggcgccgccgaagacg
aaggccctcagtggcaccccggagccgccgccggtcaaatcaaccggtggcgccggcggc
gggggcacgaaggcgtccggttatgagggcacgccgaaggactacacgcccccgccgggc
tcgaagggtgccgacagcggcggtacgaaggcatccgggtacgagggcaacccgaaggac
tacacgcccccggccggcaaggccggtggtgcggacgagggaacgacggcgtcggggtac
agcggcggcggctcgaaggactacacgcccccggccggcaaggccggtggtgcggacgag
ggaacgacggcgtcggggtacagcggcggcggctcgaaggactacacgcccccggccggc
aaagccggcggcgccgacgaaggaacgaaggcgtccggctacaccggtggcgggtcgaag
gacagcgcgccgccggccggctcgaaggcgggggacgacgcgacccacgcgtccgggtcg
ccagacggtaccggcgccgccggggaagtgcccacgtccggcggcgggagtcgcggcctg
cccaaggacgacagcaccggcacgtccggcacgaagagcctcaaggacagcaacgccgat
ccgcacgagaacagcaccccggtcaaggaccgcatcgactgcggtgacccgatcgacgtc
gccaccggctggatgatgctcacccagaccgacttgacagtgcccggcgcgctgccgctg
gaggtttcacgcacgcacctgtcgtcctaccgtgccggccggttcttcggtccaacctgg
gcgtccacagtggaccagcggatcgaggcgggagacgacggcctgcatgtcgcgctggcc
gacggcagtatccagacctatcccgtcccggccgacgaccctgtgctgcccgtcgccggc
cccgcccggtcgctctcccggttcgagggcggctacctcgtgaccgatgacgaccaggcg
cagtccctgttcttcaccgacaacgggtccggcgtctgcccgctcgcgatgatcggcgac
ggcgacggcaaccggatcgaggtggtccgcgacgaaataggcgtgcccgtcgcgatggtc
cactcctccggcaccagcgtgctgttcgacagcaccgacggccggatcaccgcgctgcgc
gcccaggacggcaccgtgctggccgcctactcctacgacgcgcgcggccggctcatcgag
atcgtcgaccaagcgggcacgcccacgcgtttcacctacgatgccgacggccgcatcatc
cggtgggacgacgtcaacggccgttggtacggctacggattcgacagcgcgggccgcgtc
gtgcgcgcgaccggcaccgacggctacctcgactgtgccatcgagtacgaccgcgagcgc
ctcgtcaccaccgtcaccgactcgctcggagctgtgcggcgattccacctcgacgaccgg
ctcgacgttatcgccgagaccgacccgctcggccacaccacgacgttccggtacgacgaa
cacggccggctgctcacccgcaccgacccgctgggccgccagactcgctgggaacgtgac
gaggccggtcgcgttacggccgtcaccgccccagacggcacgcgctcgctgaccgagtac
aacgagctcggccgcccgtccgccgcgatcggcccggacggggccacctggcggtacgag
tacgacacgcgcggcaaggccgccgccatcgtcgacccgctcggcgcacggaccaccttc
ggctacgacgaacgcggcaacctcgcgctgatcaccgacgcgctcggcggcgccactcac
atcgagtccgaccccgccggccggccgctgaccgtcgtcgacgaggaaggcgccgtcgtg
cgctacacctacgacgacctcggccgcaccacctccgtcaccgaccaggtcggcgccgtc
acccagtatcgctgggccggcggcgacgagccggccgaggagatcggcccggacggcgcg
acctggcagtggcaggacgccgcggtcggcaacactcaggaccgcagcgatccgcgcggc
aaccggacccgcaccgagtacgcacagttcgacctgcccgtcgcggagatcggcccggac
gggcagcgcatcgagtacgcctacgacaccgagctgcggctggtctcgatgaccaacgag
caaggcctcgtgtggcgctacgactacgacgccgccggcaacctggtccgcgagaccgac
ttcaacggccgcacgctcacctaccgctacgacgcggccggcgatgtcgtcgcccgtacc
aacggtgcaggtgagaccacccagctgcaacgcgacgcgatgggccgcgtcgtgcgacgc
acgaccggcggcgacgtcgcgaccttcgcgtacgacgccgccggccggctcgttgtcgcc
cgcaacgccgacgccgaagtcaccttcgcctacgacgcactcgggcgggtggtgacggaa
accgtcgacggtcgtccggtgcgctcagagtacgacgcgctgggccgccgcgggctgcgg
cgcacaccgtccggcgccgaatcccgcttcgactacggtccggcgggcaccgtggcggcg
ctgcacgccgggagccgcacgatccggttcgaccacgacctggccggccgcgagcgcgtc
cgccgcctgggtgcggcggaactgcaccagagctgggactccggcgaccgcctcaccgcg
cagagcgtgaacacgggcgcgcggacgacgcagcatcgcgaatacggctacctcgccgac
ggctacctcagctcggtcgccgatgcgctgtccggcccgcggacgttcgacgtcgaccgc
accggccgggtccgctccgtcgccggtcacggctggcaggaaagctacgcctaccacccg
tccggcgccatcgcccaggcgcagactcccagcgcaccgtccgccggtccccgggagtac
cgcggcacgctcctggcgtcggcaggcgcgctgcgcttcgcccacgaccccgaaggccgc
accacggtgcgcgcgaccgggcccggcggcccgcaatggcagttccggtggaacgccgaa
agccgcctgaccacggtcgtcaccccgaacggcgagcactggcgctaccgctacgacgct
ctcgggcgccgcgtcgccaagcaacggctcgccgccgacggccggatcaccgaacaggtc
cagttcgcctgggacggtgccaccctcgccgaacaggtccacagtggacccggcaggccg
cagatcgcgaccgtgtgggaattctcgcccggcaccggccgtgcgctcgcccagaccgaa
cgcgtcctcggcaccgcggacgagcggttccacgcgatcgtcaccgacctcgtcggcgcg
cccagcgaactcgtcgacgagcgcggcgaggtggcctggcaccgccaggccacgttgtgg
ggcaaggtcctctccgccccgggcggcgcgacgaccccgctgcgcttccccggccagtac
cacgacgcggaaaccgggctgcactacaacgtcaaccggtactacgacccggagaccgga
cggtacctctcgcacgacccgctcggcctcgatccgggcccggactcccaggcgtacgtg
ctcaacccgaccgcgctggccgacccgctgggtttgatgccgaaggcgactccgtgcgcc
gcggcgaaaaagaaggccgcgcagcagaaccagtcgccgtacgggaagaagcccaacccg
ccgcgggtccaaccggacggcacctacggcaagacggccgcggaggtgaaacggctgaac
cacaagtacttcgacgacatcagcaaggacccgtcctggccccacagcaagaagcagctc
tccggcgaccacacccaccagtccgaacacccgatcggctaccacgcgctcgcacctgat
ttcaagcgtggcgcgtccgccgacgccaagcggatcgaggacgacgcacccgcctaccag
gagtcctaccaggcgcaccgggacaacatcggcaccggtaaccgggtcgagcaggacggc
tcggggctcgacgccaggggctaccgcgaatcactcgacaacgcggtgagcggcgggcgg
ccgagcgacgcggtccagctgaaccagctgacctacgccaaccagcacatgaaaccggtt
ctcgagaaaaacccgaactggaagagttacgacgacactccggacgaaccgcgcttcaac
caaaagactgagccgaacccggcctatgtggacaaggggaccacgccgaacgaaccgaag
aggctgccggtgatggaaaacgcgcccgaaagggacagcttccggccgaccgcgggcacc
acccagggcaagatcgccgacgactcctaccaccgcatggtcgaccacatgcgggaccgg
ccgctggaatacagcgaccggcaaggcggcttcgctcacacccccggcccggacagggcg
gacgtcgcggaaatgcacctggcgcgggacaccgcgcgatccgggcagtacccgacccgg
gccgaggaggacgcggccgtcgaacggaccttcgaccaccggaccccggcggacgaggcc
agggcgaagcagtacgacgacgcgcacgacgcggccgaagccaaccggaccgatcggccg
gcgcccggtcagaaggcggaggactacgcagcccagcgccaggaggaagccatggcccag
cggctgggtatctcccggcaggagctgcgcgaccggctcgagcgtgcacgcgagaaccag
gagaacgcgatggacgtcgactga
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