Amycolatopsis carbonis: QRX50_30630
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Entry
QRX50_30630 CDS
T10496
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
acab Amycolatopsis carbonis
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acab03000
]
QRX50_30630
Transcription factors [BR:
acab03000
]
Prokaryotic type
Helix-turn-helix
Other families
QRX50_30630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
GAF
HTH_50
HTH_29
Sigma54_activ_2
HTH_30
HTH_22
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
WIX75824
UniProt:
A0A9Y2I9K3
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Position
6188529..6190247
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AA seq
572 aa
AA seq
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MSTEEVDAESVRKTILASWWRSRTHRVAADQVKTPYVADPNLETPLLQSAGAVLDALEDK
LSDLAVSVVLTDDQALVLDRRTEDRALERYLDGVQLARGFSYAEEFVGTNGIGTALEGRQ
ATAVFGHEHYAENLDTLACAGVPIRHPISGQVLGLLDLTCWKKDAGPLLLALAKATAHDI
ETELTNQVGLRELSLFSAYLRACRRGQGIVLAVNNDLVMLNDHARQLLVPEDQAALLARA
VEALSSQSDRSLSMDLPSGARARLSYTPVSSDVGPAGGVVRARLLQEPEVVSARIDTRQP
VLPGIVGTGALWVRACHSVGRFARDRKWTVVEGEPGSGKLAVARAAHSGSTASAPCEVVE
LDGIKAGEWEAPVRRALLKGPGTVVFRHLDKLSQEEQRALAAVLDDARLDARVWGVATVS
EGEQDGLDTDLMRHFPTSVTVPPLRHHIEDVRVLVPFLLAQLGKGPLLHCSPAALQLLLR
NEWPGNAAQLRQVLRKVVHTRRAGVIEPEDLPPECRTVVKRVLNPLESLERDAIVRSLLD
ADGNKSRAAHSLGMSRATIYRKIRDYGIDIPS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacggaggaggtcgacgcggaaagcgtccgcaagacgatcctcgcttcgtggtgg
cggtcccggacgcaccgggtggccgctgaccaagtgaaaactccgtacgtggccgatccc
aatctcgagacgccgctgctgcagagcgcgggcgcggtgctcgacgcgctggaggacaag
ctcagcgacctcgcggtgagcgtggtgctcaccgacgaccaggcgctggtgctcgaccgc
cggaccgaagaccgcgccctcgagcggtacctcgacggggtgcagctcgcgcgcgggttc
agctacgccgaggagttcgtgggcacgaacgggatcggcacggccctcgaaggcaggcag
gcgaccgcggtgttcggtcacgagcactacgcggagaacctcgacacgctcgcgtgcgcc
ggcgtgcccatccgccacccgatctcgggccaggtcctcgggctgctggatctcacgtgc
tggaagaaggacgccggcccgctgctgctggccttggcgaaggcgaccgcgcacgacatc
gagacggagctgaccaaccaggtcggcctgcgcgagctgagcctcttctcggcgtacctg
cgggcgtgccggcgcgggcaggggatcgtgctcgcggtcaacaacgacctcgtgatgctc
aacgaccacgcccgccagctgctcgtgcccgaggaccaggccgcgctgctggcccgcgcc
gtggaggcgctgagctcgcagtcggaccgctcgctgtcgatggacctgcccagcggtgcc
cgcgcgcggctgtcctacaccccggtctcgagcgacgtcggcccggccggcggcgtcgtg
cgggcccggttgctgcaggagcccgaggtcgtgtccgcgcgcatcgacacgcgccagcct
gtactgcccggcatcgtcggcacgggcgcgttgtgggtgcgggcgtgtcactcggtcggc
cgcttcgcgcgcgaccggaagtggaccgtggtcgagggtgaacccggcagcggcaagctc
gccgtggcccgcgccgcgcactccggctcgacggcgagcgcgccgtgcgaggtcgtggag
ctcgacggcatcaaggcgggggagtgggaggctccggtgcggcgggcgctgctcaaaggc
ccgggcacggtagtgttccgccacctggacaagctttcgcaggaggagcagcgggcgctg
gccgcggtgctggacgacgcgcggctcgacgcccgcgtgtggggcgtcgcgacggtgtcg
gagggtgagcaggacggcctcgacaccgacctgatgcgccacttcccgacgtcggtcacc
gtgccgccgctgcgccaccacatcgaggacgtgcgtgtgctcgtgccgttcctgctcgcg
cagctgggcaagggcccgctgctgcactgctcgccggccgcgctgcagctgctgctgcgc
aacgagtggccgggcaacgccgcgcagctgcggcaggtgctgcgcaaggtcgtgcacact
cgccgcgcgggcgtgatcgagcccgaggacctgccgccggagtgccggacggtcgtcaag
cgcgtgctcaacccgctggagtcgctggagcgcgacgcgatcgtgcgcagcctcctcgac
gccgacgggaacaagtcccgcgcggcccactccctcggcatgtcgcgggccacgatctac
cgcaagatccgcgactacggcatcgacatcccgtcgtga
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