Amycolatopsis carbonis: QRX50_45960
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Entry
QRX50_45960 CDS
T10496
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acab Amycolatopsis carbonis
Pathway
acab03030
DNA replication
acab03430
Mismatch repair
acab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QRX50_45960
03430 Mismatch repair
QRX50_45960
03440 Homologous recombination
QRX50_45960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acab03032
]
QRX50_45960
03400 DNA repair and recombination proteins [BR:
acab03400
]
QRX50_45960
Enzymes [BR:
acab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QRX50_45960
DNA replication proteins [BR:
acab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QRX50_45960
DNA repair and recombination proteins [BR:
acab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QRX50_45960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
Sulfotransfer_3
WHD_2nd_Lhr
UVR
P_T4SS_TraN
Motif
Other DBs
NCBI-ProteinID:
WIX78612
UniProt:
A0A9Y2MXA0
LinkDB
All DBs
Position
9319836..9321554
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AA seq
572 aa
AA seq
DB search
MDTGPRPGQAQLAFDELGTPLRDTTFVVFDLETTGTKPGPDAITEIGAVKVRGGEVVAEF
ATLVNPGSPIPPQVVELTGITQAMVYDAPRIERVLPAFLEFISGTVLVAHNSGFDTGFMR
AACEGHGYVWPRATVICTVKLARRVIPREEARSYRLSNLAMLLGSRTRPTHRALDDARAT
VDVLHALLERVGNVGVHTVEELVDYLPEVTTAQRRKRHLAADLPARPGVYLFRGPREEVL
YVGTARDLRRRVRQYFTGSESRGRIREMVALAERVEAIECAHSLEAEIRELRLIAAHRPM
YNRRSKNPHHAWWVGLTDEAFPRLSVVRLPREGTLGPFRSQADARTAADTLAGAAGLRTC
TLRISARGGSATPCVLAELGRCGAPCAGRQTVEDYSPAVVATRDLISGQDGRPLKLAAAQ
LDRLSEGRHYEQAARHRDELADLVRAVGRSHRQAALADIAELIAAHPDGNGGWELSVIRH
GRLASAGVARRGVPPMPVVEHLVAAAETVLPGEGPLRGASGEEVAVLLRWLARPGVRLVR
TTRPWAEPTAVAGWRGWLDLAAGARTLERVAG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggaccgcggcccggccaggcgcagctggccttcgacgagctcggtaccccg
ttgcgggacaccacgttcgtcgtcttcgacctcgagaccactggcacgaagccggggccg
gacgcgatcaccgagatcggggccgtgaaggtgcgcggcggtgaggtggtggccgagttc
gcgacgctggtgaacccgggttcaccgatcccgccgcaggtggtggagctcacgggcatc
acgcaggcgatggtctacgacgccccgcgtatcgagcgcgtgctgcccgcgttcctcgag
ttcatctccggcaccgtgctcgtggcccacaactcggggttcgacacgggtttcatgcgg
gccgcctgcgagggccacggctacgtctggccgcgcgccacggtgatctgcacggtgaag
ctcgcccggcgcgtgatcccgcgcgaggaggcccgcagctaccgcctctcgaacctggcg
atgctgctcggctcgcgcacccggcccacgcaccgcgcgctcgacgacgcccgcgcgacc
gtcgacgtgctccacgcgctgctggagcgggtcggcaacgtcggcgtgcacaccgtcgaa
gagctcgtggactacctgcccgaggtgaccaccgcgcagcggcgcaaacgccacctggcg
gccgacctgccggcgcggcccggcgtgtacctgttccgcggcccacgcgaggaggtcctc
tacgtcggcacggcgcgggacctgcgccggcgcgtgcggcagtacttcacggggtcggag
agccgcgggcgcatccgagagatggtggcgctggccgagcgcgtggaagccatcgagtgc
gcccactcgctggaggccgagatccgcgagctgcggctcatcgcggcccaccggccgatg
tacaaccggcgctcgaagaacccgcaccacgcgtggtgggtcgggctcaccgacgaggcc
ttcccgcgcctgtccgtggtccggctgccgcgcgaaggcacgctcggcccgttccgcagc
caggccgacgcccgcacggcggccgacacgctcgcgggcgccgccgggctgcgcacctgc
accctgcggatctcggcccgcggcggttcggccacgccgtgcgtgctcgccgagctgggc
cgctgcggcgcgccctgcgccggccgccagaccgtggaggactactcccccgccgtcgta
gccacccgcgacctcatctccggtcaggacggccgtcccctcaaactcgccgcggcccag
ctcgaccggctgtcggagggccggcactacgagcaggccgcccggcaccgcgacgagctg
gccgacctcgtgcgcgccgtcggccggtcccaccgccaggccgcgctcgcggacatcgcc
gagctcatcgcggcccatccggacggcaacggcggctgggagctctccgtgatccgccac
ggccgcctcgcgtccgccggcgtcgcccgccgcggtgtgccgccgatgccggtggtggaa
cacctcgtcgccgccgcggaaaccgtgctgccgggcgaagggccgttgcgcggcgcgtcg
ggggaagaggtggcagtgctgctgcgctggctcgcccgccccggcgtgcggctggtgcgc
accacgcgtccgtgggccgaacccactgccgtggccggctggcgcgggtggctcgacctg
gcggccggtgcgaggacgctggagcgggtggcggggtga
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