Amycolatopsis carbonis: QRX50_46210
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Entry
QRX50_46210 CDS
T10496
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acab Amycolatopsis carbonis
Pathway
acab03030
DNA replication
acab03430
Mismatch repair
acab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QRX50_46210 (dnaE)
03430 Mismatch repair
QRX50_46210 (dnaE)
03440 Homologous recombination
QRX50_46210 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acab03032
]
QRX50_46210 (dnaE)
03400 DNA repair and recombination proteins [BR:
acab03400
]
QRX50_46210 (dnaE)
Enzymes [BR:
acab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QRX50_46210 (dnaE)
DNA replication proteins [BR:
acab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QRX50_46210 (dnaE)
DNA repair and recombination proteins [BR:
acab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QRX50_46210 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WIX78659
UniProt:
A0A9Y2IEW3
LinkDB
All DBs
Position
complement(9371664..9375251)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSNDSFVHLHVHTEYSMLDGAAKIGPLFAEAARLGMPAVGMTDHGNMYGGDEFYQTSKKH
GLKPIIGIEAYIAPESRFHKKPVFWGQASQRGSDELGEGGDVSGAGAYTHMTMLAENATG
LRNLFKLSSIASIQGYYRKPRMDRELIAENHEGIIATTGCPSGEVQTRLRLGQREAAIQA
ASDYKDIFGADNFFLELMDHGLPIERSVREGLLEVGKLLDLKPLATNDSHYVTKDQADTH
SALLCVQAGKTLNDPTRFKFDGDGYFLKSAEEMRQYWDKEVPGAADSTLLIAERVQSYED
VYSHKDRMPVFEVPEGHTEATWLRHQVADGLKWRFPEGVPDGYEERCDYELGVIEQKGFP
AYFLIVADLIQHAREVGILVGPGRGSAAGALVAYALGITNLDPIPQKLLFERFLNPERMS
MPDIDIDFDDRRRGEMIRYATDKYGADRVAQVITFGTIKTKAAIKDSARVHFGQPGYSIA
DKISKALPPPIMAKDIPLSGIVDSKHERYAEAAEVRTLVETDEECKTIFDTARGLEGLIR
NAGVHACAVIMSSEPLTEAIPVWQRDDGSIITGWDYPSCENIGLLKMDFLGLRNLTVIGD
ALANIKANRGEEIDLDRLGFDDPEAYKLLGRGDTLGVFQLDGGAMRDLLRRMLPTGFEDI
VAVLALYRPGPMGMNAHNDYADRKNNRQKVTPIHPQLEEPLREILSETYGLIVYQEQIMQ
IAQKVAGYTMGRADTLRRAMGKKKKEVLEKEYEGFEEGMKASPLLPGGFSPEAVKALWDT
ILPFAGYAFNKSHAAAYGLIAYWTAYLKANYTPEYMAALLTSVGDNKDKSAIYLSECRRL
GIKVLPPDVNESALRFAAVGNDIRFGLGAVRNVGANVVESVIKTREEKGKYSSFTDFLDK
SELVACNKRVMESLIKAGGFDTMGHTRLSMIQVHEDAVEAVVPLKRQEAMGQFDLFGSFG
GDDDSAEATPSSSPLAHLKFGEEEYPRKQLLAYEREMLGLYVSAHPLDGAERILRKHAPK
PIAGLLADPPREGEVVISGLLTSLERRVNKKGEPWAICTVEDMDAAIEVLFFAKAYSMFA
ADLVEDNAVLVKGRVNWREDKMSVFGGGLVPLDLSEIGNGDEEPPLMLLAAAEKIDQSVV
SELKSTLLAHKGETPVHLKLVGKNQTVFALYDYPVKVSSMLIGELKGIPGITANT
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaacgattccttcgtccacctgcacgtccacaccgagtactcgatgctcgacggt
gcggcgaagatcggacccctcttcgccgaggcggcgcggctgggcatgcccgcggtgggc
atgaccgaccacggcaacatgtacggcggcgacgagttctaccagacctccaagaagcac
ggcctgaagccgatcatcggcatcgaggcctacatcgcgccggagagccgcttccacaag
aagccggtgttctggggacaggccagccagcgcggctcggacgagttgggtgaaggcggc
gacgtctccggcgccggtgcctacacccacatgacgatgctggcggagaacgccaccggg
ctgcggaacctgttcaagctctcgtcgatcgcctcgatccagggctactaccgcaagccg
cgcatggaccgcgagctgatcgcggagaaccacgaaggcatcatcgccaccaccggctgc
ccgtcgggcgaggtgcagacccgcctgcggctgggccagcgcgaggccgcgatccaggcc
gcgtcggactacaaggacatcttcggcgccgacaacttcttcctcgagctgatggaccac
ggcctgccgatcgagcggtccgtgcgcgagggcctgctcgaggtcggcaagctgctcgac
ctcaagccgctcgcgaccaacgactcgcactacgtcaccaaggaccaggccgacacgcac
tcggcgctgctgtgcgtgcaggcgggcaagacgctcaacgacccgacccggttcaagttc
gacggcgacggctacttcctcaagtcggccgaggagatgcgccagtactgggacaaggag
gttccgggcgcggccgacagcacgctgctgatcgccgagcgcgtgcagtcctacgaggac
gtctactcgcacaaggaccgcatgccggtcttcgaggtgcccgagggtcacaccgaggcg
acgtggctgcgtcaccaggtggccgacggcctgaagtggcggttcccggagggcgtgccc
gacggctacgaggagcgctgcgactacgaactcggcgtcatcgagcagaagggcttcccg
gcctacttcctcatcgtcgccgacctcatccagcacgcgcgcgaggtcggcatcctggtc
ggccccggccgtggttccgccgccggcgcgctcgtcgcgtacgcgctgggcatcacgaac
ctcgacccgatcccgcagaagctgctgttcgagcggttcctcaaccccgagcgcatgtcg
atgcccgacatcgacatcgacttcgacgaccgccgccgcggcgagatgatccgctacgcc
accgacaagtacggtgccgaccgcgtcgcccaggtgatcaccttcggcaccattaagacc
aaggccgcgatcaaggactcggcccgcgtgcacttcgggcagccgggctactcgatcgcc
gacaagatctccaaggcgctgcctccgccgatcatggccaaggacattccgctgtcgggc
attgtcgactcgaagcacgagcgctacgccgaagccgcggaggtccggaccctcgtcgag
accgacgaagagtgcaagacgatcttcgacaccgcccgcgggctcgagggcctgatccgc
aacgccggcgtgcacgcctgcgcggtcatcatgtccagcgagccgctcaccgaagcgatc
cccgtgtggcagcgcgacgacgggtcgatcatcaccggctgggactacccgtcgtgtgaa
aacatcggcctgctgaagatggacttcctgggcctgcgcaacctcacggtgatcggcgac
gcgctggccaacatcaaggccaaccgcggcgaggagatcgacctcgaccgcctcggcttc
gacgatcccgaggcctacaagctcctgggccgcggtgacacgctcggcgtgttccagctc
gacggtggcgcgatgcgcgacctgctgcgccgcatgctgccgaccgggttcgaggacatc
gtcgcggtgctcgcgctgtaccggcccggcccgatgggcatgaacgcgcacaacgactac
gccgaccgcaagaacaaccggcagaaggtcacgccgatccacccgcagctcgaagagccg
ctgcgcgagatcctgtccgagacctacggcctgatcgtgtaccaagagcagatcatgcag
atcgcgcagaaggtcgcgggctacacgatgggccgagcggacacgctgcggcgagcgatg
ggcaagaagaagaaggaagtcctcgagaaggagtacgagggcttcgaagagggcatgaag
gccagccccctgctgcccggcggcttctcgcccgaagcggtcaaggcgctatgggacacg
atcctcccgttcgccggctacgcgttcaacaagagccacgcggccgcctacggcctgatc
gcgtactggacggcctacctcaaggcgaactacacgccggagtacatggccgcgctgctc
acgtccgtgggtgacaacaaggacaagtcggccatctacctgtcggagtgccgtcgcctc
ggcatcaaggtgctgccgccggacgtcaacgagtcggccctgcgcttcgcggccgtcggg
aacgacatccgcttcgggctgggcgccgtgcgcaacgtcggcgccaacgtggtggagtcg
gtcatcaagacgcgcgaggagaagggcaagtactcctcgttcaccgacttcctcgacaag
tcggagctggtggcctgcaacaagcgggtcatggaatcgctgatcaaggccggcgggttc
gacacgatgggccacacccgcctgtcgatgatccaggtgcacgaggacgcggtggaagcc
gtcgtgccgctcaagcgccaggaggccatgggccagttcgacctgttcggctccttcggc
ggggacgacgactcggccgaggccacgccgtcctcgtcgccgctcgcgcacctgaagttc
ggtgaagaggagtacccgcgcaagcagctgctcgcctacgagcgggagatgctgggcctg
tacgtgtccgcgcacccgctcgacggtgccgagcgcatcctgcgcaagcacgcgcccaag
ccgatcgcgggcctgctcgccgatccgccgagggagggcgaggtcgtgatctcgggtctg
ctcacctcgctggagcggcgcgtgaacaagaagggcgagccctgggcgatctgcacggtc
gaggacatggacgccgcgatcgaggtgctgttcttcgccaaggcgtactcgatgttcgcc
gcggacctggtcgaggacaacgcggtgctggtcaagggccgggtcaactggcgcgaggac
aagatgtcggtgttcggcggcgggctcgtgccgctggacctgtccgagatcggcaacggc
gacgaggaaccaccgctgatgctgctggccgcggccgagaagatcgaccagtcggtggtg
agcgagctcaagtcgacgctgctggcgcacaagggcgagaccccggtgcacctgaaactc
gtcggcaagaaccagaccgtgttcgcgctttacgattacccggtgaaggtcagctcgatg
ctcatcggtgaactcaagggcatccccgggatcaccgccaacacctga
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integrated database retrieval system
