Amycolatopsis carbonis: QRX50_47930
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Entry
QRX50_47930 CDS
T10496
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
acab Amycolatopsis carbonis
Brite
KEGG Orthology (KO) [BR:
acab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acab03032
]
QRX50_47930
03036 Chromosome and associated proteins [BR:
acab03036
]
QRX50_47930
03400 DNA repair and recombination proteins [BR:
acab03400
]
QRX50_47930
DNA replication proteins [BR:
acab03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QRX50_47930
Chromosome and associated proteins [BR:
acab03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QRX50_47930
DNA repair and recombination proteins [BR:
acab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QRX50_47930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
WIX78977
UniProt:
A0A9Y2IFU6
LinkDB
All DBs
Position
complement(9742317..9742985)
Genome browser
AA seq
222 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGTKKLPKATAVKRTTTATAATASRATTTRA
TAATGTRAAASRTTATRPATTRSTTTRTRATAAKPAAATKTAAAKPAATRAKAATTKAAA
AKPAAKATATKAAAAKPAAAKPAAKKTAAKPAAKRTSAAKKK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgtctgggcgacaaaaaggtt
gcttcggaggccgtcgacggtctcgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccgggttcggtgtgttcgagaagcgtgcccgtgccgcccggaccgcg
cgtaacccgcgcacgggtgagacggtgcgggtgaagaagaccaacgtgccggccttccgc
gcgggcacgacgttcaaggacgtcatctccggcacgaagaagctgccgaaggccaccgcc
gtcaagcgcaccaccaccgctacggctgccaccgcctcccgcgcgaccaccacgcgtgcg
accgcggcgaccggcacgcgtgcggctgcctcgcgcaccacggcgacccgcccggccacc
acgcgctccaccacgacgcgtacccgcgccaccgccgcgaagccggccgctgcgacgaag
accgccgctgccaagcccgccgcgacgcgcgcgaaggccgccaccaccaaggctgccgct
gccaagccggccgccaaggccacggcgaccaaggccgctgccgcgaagccggccgctgcc
aagccggccgcgaagaagaccgctgccaagccggcggccaagcgcaccagcgctgcgaag
aagaagtaa
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