Anaerostipes caccae: EYQ97_00505
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Entry
EYQ97_00505 CDS
T06754
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acac
Anaerostipes caccae
Pathway
acac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EYQ97_00505 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acac03021
]
EYQ97_00505 (rpoC)
03400 DNA repair and recombination proteins [BR:
acac03400
]
EYQ97_00505 (rpoC)
Enzymes [BR:
acac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EYQ97_00505 (rpoC)
Transcription machinery [BR:
acac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EYQ97_00505 (rpoC)
DNA repair and recombination proteins [BR:
acac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EYQ97_00505 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QMW69861
LinkDB
All DBs
Position
119018..122593
Genome browser
AA seq
1191 aa
AA seq
DB search
MIGSSNEYSNHKIAFDAIKIGLASPEKIREWSRGEVKKPETINYRTLKPEKDGLFCEKIF
GPSKDWECHCGKYKKIRYKGVVCDRCGVEVTKANVRRERMGHIELAAPVSHIWYFKGIPS
RMGLILDISPRSLEKVLYFACYIVLDAGETDLAYKQVLTEKEYRDAYDKYGSSFRVGMGA
ESIKELLEAIDLPAEAKSLKDEFKTATGQKRARIVKRLEVVEAFLNSENNPEWMILDVVP
VIPPDIRPMVQLDGGRFATSDLNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEAV
DALIDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKI
YQCGLPKEMAIELFKPFVMKELVERKLSHNIKSAKKMVEKLQPEVWDVLEDVIKEHPVML
NRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHLPLSVEAQAECRFL
LLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTLEKEGDKGEGKYFKSENEAFLAYENKAIT
LHARINVRRTKIDKDGNKISKVVQCTLGRILFNEIIMQDLGFVDRSNPENALDLEIDFHV
GKKQLKQILDKCINIHGATKTAEVLDDIKALGYKYSTRGALTVSISDMTVPEEKKEILAG
AQDQAEFINNQFKRGLMTEEERYKAVVKTWFDADDVLTDKLITGLDKYNNIFMMADSGAR
GSNQQIKQLAGMRGLMADTSGRTIELPIKSNFREGLDVLEYFISAHGARKGLSDTALRTA
DSGYLTRRLVDVSQDLIIREADCGLDADGQIPGMYVEAFMDGQEVIESLQDRITGRYAAE
EIKHPETGEVLVKSNHMITPRRAKTVIDAGLTKVKIRTMLTCQSQVGCCAKCYGSNMATG
QAVQVGEAVGIIAAQSIGEPGTQLTMRTFHAGGVAGDDITQGLPRIEELFEARKPKGLAI
ISEFAGKVQIKDTKKKREVVITNKETGDMKAYLIPYGSRLKVMEGQEVEAGDELTEGSVN
PHDILKIKGIRAVQDYMIREVQRVYRLQGVDINDKHVEVIVRQMLKKVRIEEGGDSDYLP
GAMIDVLEFEKTNRELEERNLETAKAEQIILGITKASLATDSFLSAASFQETTKVLTDAA
IKGKVDPLVGLKENVILGKLIPAGTGMKRYRNVKINTEEEELTLEDEIDFE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgataggatcaagcaacgaatattcaaatcataaaattgcctttgatgcaattaagatc
gggttggcttccccggaaaagatccgagagtggtccaggggagaagtaaaaaaacctgaa
accatcaattatcgtaccttgaagcctgaaaaagacggtcttttctgtgagaagatattc
gggccaagcaaagactgggagtgtcactgcggtaaatataaaaaaatcagatataaaggt
gttgtctgtgaccgatgcggagttgaggtgacaaaagccaacgtccgccgtgagcgtatg
ggacacatcgaactggcagctccggtttcccatatctggtacttcaaagggattccgagc
cgtatgggactgatcctggatatttctccgagaagtctcgaaaaagtattgtatttcgcc
tgctatattgtgctggacgcaggagagacggatctggcttacaaacaagtattgacagaa
aaagaatacagagatgcctatgataaatacggcagttctttccgcgtgggaatgggagcc
gaatctatcaaggaactgctggaggccatcgaccttccggcagaggcaaaatctttaaaa
gacgaatttaagacggccacaggacagaaaagggcaagaatcgtaaaacgcctggaagtc
gtagaagccttcttaaactctgaaaataatcctgagtggatgatccttgatgtagtaccg
gtcattcctccggatatccgtccgatggtacagctggacggaggacgttttgctacttct
gacctgaatgacctttacagaaggatcatcaacagaaataaccgtctgaaacgtctgctg
gaactcggggctccggatatcattgtgagaaatgagaaacgtatgctccaggaagcggta
gatgctctgattgataacggccgccgcggacgtccggttacaggaccgggtaaccgtgcg
ctgaaatccctttccgatatgctgaaaggtaaacagggacgtttccgccagaacctgctc
ggaaaacgtgttgactactcaggacgttctgttattgtcgtaggaccggaactgaagatt
taccagtgtggtcttccgaaagagatggcaatcgagctgtttaaaccatttgttatgaaa
gaactggtggaaagaaaactttcccataatataaaatctgccaagaagatggtagagaag
ctccagccggaagtatgggatgtgctggaagatgtcatcaaagaacatccggttatgtta
aaccgtgcaccgacactgcacagacttggcatccaggcatttgagccgatcctcgtagaa
ggtaaagcgatcaagctgcatccgctggtatgtactgcttacaacgccgatttcgacggt
gaccagatggctgtccatctgcctctgtccgtggaagcccaggctgagtgccgcttcctt
ctgctgtcaccgaacaacctgctgaaaccttccgatggtggtccggtagccgttccttca
caggatatggttctcggtatttactatctgactctggaaaaagagggagataagggagaa
ggcaagtactttaagtcagaaaatgaggcgtttcttgcctacgaaaataaagcgatcacc
ctgcacgcaaggatcaatgtaaggcgtacaaagattgataaagacggaaataagatttcc
aaggtcgtacagtgcactctcggaagaattttattcaatgagatcattatgcaggatctg
ggatttgtagacagatccaatccggaaaacgcactggacttagagattgatttccacgta
ggaaagaaacagttaaagcagatccttgacaaatgtatcaatatccacggcgctacaaag
acggccgaagtacttgatgatatcaaggcactgggatacaaatattctacaagaggagcc
ctgaccgtttctatttcagatatgacagtgccggaagagaaaaaggaaattcttgcagga
gcacaggatcaggccgagttcatcaacaatcagttcaaacgcggtctcatgacagaagaa
gagcgctacaaagccgttgtcaaaacatggtttgacgccgatgacgttttgactgacaaa
ctgatcacaggattagataaatataataacatctttatgatggccgattccggagcccgt
ggttctaatcagcagatcaaacagctggcaggaatgcgtggactgatggccgatacgtca
ggacgtaccattgagctgccgatcaagtccaatttccgtgaaggtctggacgtactggag
tactttatctctgcccacggtgcgagaaagggactttccgatacggccttgagaactgcc
gattcaggttacctgacaagacgtcttgtagacgtttctcaggatctgatcattcgggaa
gcagactgcggactggatgcggacggacagattcctggcatgtatgtggaagcgttcatg
gacggacaggaagttatcgaaagtcttcaggaccgtatcacaggacgctatgctgcagaa
gagatcaaacatcctgaaacaggagaagttcttgtaaagtcaaaccacatgatcactcca
agaagggctaagacggtcatcgatgcaggccttacaaaggtcaagatcagaacgatgctg
acctgccagtcacaggtgggatgctgtgcaaaatgctacggctccaacatggctaccggt
caggcagtacaggtgggtgaggcagtcggtatcatcgcggcacagtccatcggtgagcct
ggtactcagctgaccatgcgtacgttccatgccggaggagttgccggtgacgatatcaca
cagggtcttccgcgtatcgaggagctttttgaggcgagaaagccgaaaggtcttgccatc
atctctgagtttgcaggaaaagtgcagatcaaagatacgaagaagaaacgggaagttgtc
atcaccaataaagaaaccggagacatgaaggcttatctgattccttacggttccaggctg
aaagtcatggaaggacaggaagtggaagccggagacgagctgaccgaaggttccgtcaat
ccgcatgacatcttaaagatcaaaggtatccgcgccgttcaggactacatgatccgcgaa
gtgcagagagtataccgtcttcagggtgtagatatcaacgacaagcacgtagaggttatt
gtccgccagatgctcaagaaagtccgcatcgaagaaggcggagacagcgattacctgcct
ggcgccatgatcgacgtgctggaatttgaaaagacaaacagagagctggaagaaagaaac
ttagagactgccaaggcagaacagattattctcggtattaccaaggcatctcttgccaca
gactctttcttgtccgcagcatctttccaggagacgacaaaagttcttaccgacgcggcc
atcaaaggaaaggtcgatccgttggttggattgaaggaaaacgttatcctcggaaaactg
atcccggcaggaaccggaatgaaacggtaccgcaatgtaaaaatcaacacagaggaagaa
gaactgacactcgaagacgaaatcgatttcgaatag
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