Anaerostipes caccae: EYQ97_01560
Help
Entry
EYQ97_01560 CDS
T06754
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acac
Anaerostipes caccae
Pathway
acac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYQ97_01560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acac03019
]
EYQ97_01560
03009 Ribosome biogenesis [BR:
acac03009
]
EYQ97_01560
Enzymes [BR:
acac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EYQ97_01560
Messenger RNA biogenesis [BR:
acac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EYQ97_01560
Ribosome biogenesis [BR:
acac03009
]
Prokaryotic type
rRNA helicases
EYQ97_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Peptidase_M16
FlgT_C
Card1_endonuc
Cas3-like_C_2
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QMW70057
LinkDB
All DBs
Position
340409..341995
Genome browser
AA seq
528 aa
AA seq
DB search
MDAVRFDELNINDKILKAVKEMGFEAASPIQGAAIPVVLEGRDIVGQAQTGTGKTAAFGI
PLLEKMDTKVKKPQAMILCPTRELAIQVADEIRKLAKFMHGAKVLPIYGGQNITNQIRSL
KTGANIIVGTPGRIMDHMRRHTLKLEDLKMVVLDEADEMLNMGFREDIESILKEVPEERQ
TLLFSATMPKAILDITKKYQKDSKLIKVVRKELTVPNIEQYYYEVRPKQKVEVLCRLLDM
HSPKLSIVFCNTKRMVDEVTGELKGRGYFAEGIHGDLKQSQRDRVMKSFRGGRVDILVAT
DVAARGIDVDDVDAVFNYDLPQDDEFYVHRIGRTGRAGRTGNAFTFVAGKEIYKLRDVQR
YCKTKIKARPIPSLNDVQATRAEKSLEEITGLIEENNLDKYVDMLDEFINETDFTALEIA
AAFLKKQISENEEQEAQQSEDFGDTGAEAGMVRLFINIGKKKGVRPGDILGAIAGESSIS
GDLVGAIDVHDQYTFVEVPKEVAKDVMYGMRHAKIKGKSVSMEPANRK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagtaagatttgatgagttgaatattaatgataaaatattaaaagcagtgaaa
gagatgggctttgaggctgcctctccgattcagggggcggcaatcccggtggtgcttgag
ggaagagacattgttggtcaggcacagacaggaaccggaaagaccgctgcatttggaata
ccgcttttggaaaagatggatacaaaggtgaaaaagcctcaggccatgattttatgtccc
acaagagaactggcgatccaggtggcggatgaaatccgtaaattagccaaatttatgcat
ggagccaaagtacttccgatctatgggggacagaacattacgaatcagattcggtccctg
aaaacaggagccaatattatagtaggaacaccgggccgtatcatggatcatatgcgccgt
catactctgaaattagaagatttgaaaatggttgtcctggatgaggccgacgagatgctg
aacatgggattcagagaagatatcgagagtattttaaaagaagtaccggaagaaaggcag
actttattgttctctgccacgatgccgaaggcgattctggacattacgaaaaaatatcag
aaggattccaagctgatcaaggtagtgcgcaaggaactgacagtaccgaatatcgagcag
tattactatgaggtgaggccgaaacagaaggttgaagtgctctgccgtctgctggatatg
cattctccgaagctttccatcgtattctgcaatacaaaacgtatggtagacgaagtgacg
ggagaactgaaaggccgggggtactttgcagaggggatccacggagacctgaagcagagc
cagagagaccgtgtcatgaaaagcttccgaggcggacgtgtggatatccttgtggcaacc
gatgtggctgcgagaggaatcgatgtagatgatgtagatgcagtcttcaattacgatctc
cctcaggatgatgagttttatgtgcaccggatcgggcgtaccggacgcgcaggcaggact
gggaatgcatttactttcgtggcaggaaaagaaatttataagctgagagacgtacagcgc
tactgtaaaacaaagatcaaggcaagaccgattccgagtttaaatgatgttcaggccacc
agagcagaaaagagtctggaggagatcacaggactgattgaagaaaacaatctggataaa
tatgtagatatgctggatgaattcatcaatgagactgacttcacagcattagagatcgca
gcggcatttctgaaaaaacaaatttcagagaatgaggaacaggaagcacagcagagtgaa
gactttggcgataccggagctgaagcgggaatggtaagactctttattaacataggaaag
aaaaaaggagtgcgccctggagatatcctcggagcaatagcgggagaatccagcatctcc
ggcgacctggtaggtgccattgatgtgcatgatcagtatacgtttgtagaagtgccgaaa
gaggttgcaaaagacgttatgtacggaatgagacacgcaaagatcaaggggaagagtgtc
agcatggagccggcgaaccggaaataa
DBGET
integrated database retrieval system
