Anaerostipes caccae: EYQ97_04300
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Entry
EYQ97_04300 CDS
T06754
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
acac
Anaerostipes caccae
Pathway
acac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYQ97_04300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acac03021
]
EYQ97_04300
03019 Messenger RNA biogenesis [BR:
acac03019
]
EYQ97_04300
Transcription machinery [BR:
acac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EYQ97_04300
Messenger RNA biogenesis [BR:
acac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EYQ97_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
OB_RNB
AAA
NACHT
AAA_22
AAA_24
AAA_14
ATPase_2
AAA_25
S1CSD-TOTE-2
nSTAND_NTPase5
Mor
Motif
Other DBs
NCBI-ProteinID:
QMW70552
LinkDB
All DBs
Position
880371..881714
Genome browser
AA seq
447 aa
AA seq
DB search
MVYESMSLLELRKAAKEKNLKGISSLKKQELIEYLKNNDNEHKQSEPEQETKAEQTKDVR
TDRVPRDIKSLDSGRKANGILEVLPDGYGFIRCENYLPGENDIYVSPTQIRRFNLKSGDI
LNGAIRVKSQSEKFGALLFVESVNGYRPEAAARRKHFEDLTPIFPNQRLRLETERATIPM
RMVDLLSPVGKGQRGMIVSPPKTGKTTLLKQMAQSISQNYKDIKLIVLLIDERPEEVTDF
KESVEGQNVEVIYSTFDELPDHHKRVSEMVLERAKRLVEHKEDVVILLDSITRLARAYNL
TVPPSGRTLTGGLDPAALHMPKRFFGAARNMREGGSLTILATALVETGSKMDDVIFEEFK
GTGNMELVLSRHLSERRIFPAVDIAKSGTRRDDLLLSKDEQSVVTALHKELSGSRSDEFF
EQTLNMFKRSKNNKEFIEFAKKSLLRK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggtatatgaatctatgtctttgctcgaacttcgaaaggcggcaaaggaaaagaatctg
aaaggtatcagcagtctgaaaaagcaggagctgatcgaatatttaaaaaataatgacaat
gaacataaacagagtgagccggaacaggagacgaaagcagagcagacaaaagacgtcagg
acagaccgtgtgcccagggatataaaaagcctggacagcggcaggaaagccaatggtata
ctggaagtcctgccggacggttatggatttatccgctgtgagaattatctccccggagag
aatgatatctatgtatcaccgacccagatccggaggtttaacttaaagtccggagatatc
ttaaacggtgccatccgcgtaaaaagccagagtgaaaagttcggagccctgctgtttgta
gagtccgtaaacggatatcgccccgaggcggcagccaggagaaagcattttgaagacctc
acgccgatctttccgaaccagaggctcaggctggagaccgagcgggcgacgattccgatg
cgcatggtggatctgctctctcctgtgggaaaagggcagaggggtatgatcgtatcaccg
cccaaaacaggaaagacgacgctgttaaagcagatggctcagagcatcagccaaaattat
aaagacatcaagctgatcgtactgctcattgacgagagacccgaggaagtgacggatttt
aaagaatctgtggagggacagaacgtggaggtcatctattctacgtttgatgagcttcct
gatcatcacaagagagtgtcggaaatggtgcttgagagagcaaagcgcctggtagaacat
aaagaggacgtagtgatcctcttggacagtatcacaagacttgccagggcgtacaacctc
accgtgcctccgagcggaaggacgctcacaggagggcttgatccggcagcactccacatg
ccaaaaagattttttggagctgccagaaatatgagggaaggcggaagtctcacgatcctt
gcgacagcgctggtagagacgggaagcaagatggacgatgtcatcttcgaggagtttaag
ggaaccggaaacatggagcttgtactgagccgccatctgtccgagcgcaggatcttccct
gcggtggatatcgccaaatccggtacgagaagagatgatctgctgctttccaaagatgaa
cagtctgtggtcaccgcactgcacaaagaactgtccggaagccgttcagacgaatttttc
gagcagacactgaatatgttcaaacgttctaaaaataataaggaatttattgagtttgcg
aagaaatctctgctgagaaaataa
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