Anaerostipes caccae: EYQ97_10365
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Entry
EYQ97_10365 CDS
T06754
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
acac
Anaerostipes caccae
Pathway
acac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acac00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EYQ97_10365 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acac03021
]
EYQ97_10365 (rpoD)
Transcription machinery [BR:
acac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EYQ97_10365 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QMW71668
LinkDB
All DBs
Position
complement(2128738..2129832)
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AA seq
364 aa
AA seq
DB search
MDETMLQFSEKLAGLVELGKKNKNFLEYAQIETYFKDFKLTSDMMEAIFDYLEQNGVDVL
TIPEGEDDEDLEIKEEIEEEADLTIPDGVSIEDPVRMYLKEIGKVPLLSADEEIRLAQRM
EEGDEEAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGYKFS
TYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPLPEEIAEEMD
IPVDRVREILKISQEPVSLETPIGEEEDSHLGDFIQDDNVPVPADAAAFTLLKEQLSEVL
GTLTEREQKVLRLRFGLDDSRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSRKLK
DYLD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaacaatgttacaattcagcgagaagctggcaggtttagtagaactggggaag
aaaaataaaaattttctggagtatgcccagattgagacatattttaaagattttaagctg
acatcggatatgatggaggcaatttttgattacctggaacaaaacggagtcgatgtgctc
acgatccccgagggagaggacgacgaagatctggagatcaaggaagagatcgaggaagaa
gcggacctgacgatcccggacggagtcagcatcgaggacccggtgcgcatgtatttaaag
gaaatcggaaaggtacctctgctgagcgcggatgaggagatccgtctggcccagaggatg
gaggaaggtgatgaggaagccaagaaaaagcttgcggaagccaacctgcgtctcgtagtc
agcattgcgaagcgctatgtgggacgtgggatgctgtttttggatctgatccaggaggga
aatctgggtcttatcaaggcagtagaaaaattcgattacaggaagggatataagttcagt
acgtatgccacatggtggatccgccaggctatcaccagagccattgccgaccaggcaaga
acgatccgtatccctgtccatatggtggagaccatcaacaagctgatccgtgtgtccagg
cagctccttcaggaactcggcagagagccgcttccggaagagatcgccgaggagatggat
attccagtggaccgtgtgagggagattttaaagatttcccaggaaccggtatctttagag
acaccgatcggagaggaagaagacagccacctcggagactttattcaggatgacaatgtt
ccggtgccggcggatgcggcggcatttacactgctgaaagaacagctgagcgaagtgctc
ggaactttgacggagagagagcagaaggtgttaagactgcgcttcggactggatgacagc
cgtgcaaggacgctggaagaggtaggaaaagagttcaacgtcaccagggaaagaatccgc
cagatcgaggccaaggctctgagaaagctgagacatccgagccgcagcagaaaattaaaa
gactatttagactga
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