Anaerostipes caccae: EYQ97_13750
Help
Entry
EYQ97_13750 CDS
T06754
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
acac
Anaerostipes caccae
Brite
KEGG Orthology (KO) [BR:
acac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acac03009
]
EYQ97_13750 (rlmD)
Enzymes [BR:
acac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EYQ97_13750 (rlmD)
Ribosome biogenesis [BR:
acac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EYQ97_13750 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_11
PCMT
PrmA
Methyltrans_SAM
TRM5-TYW2_MTfase
N6_N4_Mtase
Methyltransf_12
UPF0020
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QMW72280
LinkDB
All DBs
Position
complement(2837568..2839199)
Genome browser
AA seq
543 aa
AA seq
DB search
MKKKDFVEGLIEKTEFPNKGTFAFEDREITVKGVIQGQRIAGQVTKLRKGKAVARLVEVL
EPSEMEDGIPRCPHFGACGGCFYQTVSYENQLRIKEGQVRELLKDYISDETWEGIKGSPK
WWEYRNKMEFSFGDEVKGGPLALGMHKKNTFHDIVNITDCKIVDNDYNLLVSCVLNYFSE
SGCDFYHKMSHEGYLRHLVIRRSEANGDLLINIVTTSQADVDMKPLAEEMLSLPLSGSIR
GILHTVNDSLADVVQADRMETIYGEDFFYEEILGLKFKISPFSFFQTNSLGAEVLYETAR
EYVGETKDKVIFDLYSGTGTIAQMLAPVAKKVVGVEIVGEAVEAARENAGLNGLDNCEFI
AGDVLKVIDELEDKPDFIVLDPPRDGIHPKAIQKIIDFGVEKMVYISCKPTSLARDLEIF
REAGYEVERGGCVDMFPSTVHVEVVCLLSKLKSDKHIEVEVKMDELDLTVAESKVTYNQI
KEYVLEKTGLKISNLYIAQVKQKCGIIERENYNKPKNEEVKPPICPLEKEKAIMAALKYF
KMI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaggattttgtagaaggcttgattgagaagacagagtttccgaacaaaggg
acatttgcatttgaggacagggagatcacggtcaaaggagtcatccagggccaaagaatc
gcaggacaggtgacaaagctgcgaaaaggcaaggctgttgcgagactggtagaagtactg
gaaccgtctgagatggaggatgggattccaaggtgtcctcatttcggggcctgcgggggc
tgtttttatcagacagtttcctatgaaaatcagctgagaatcaaggaaggacaggtacgg
gagctgttaaaggattatatctccgatgaaacatgggagggaatcaaaggaagtcctaaa
tggtgggagtaccgcaacaagatggagttttcttttggagacgaagtcaaaggaggcccg
ctggctcttggtatgcataaaaagaatacgttccacgatattgtcaacattacggactgc
aaaattgtggataatgattataatctgctcgtctcctgtgtattaaattatttttcagaa
tcaggctgtgatttttatcataaaatgagccacgagggatatctaagacatttggtcatc
cgccgttccgaggcaaatggagacctgctgatcaacatcgtcacaacttcccaggctgat
gtggatatgaagcctctggcggaggagatgctctctctgcccctttccggaagtatccgg
ggaattctgcatacggtgaacgacagtctggccgatgtggttcaggcggatcggatggag
acgatttacggggaagattttttctatgaggaaatccttgggctgaaatttaaaatttct
ccgttttctttcttccagaccaattctctgggggcggaagtactgtatgagactgcaagg
gagtatgtgggagagacgaaggataaggtcatctttgacttgtacagcggaaccgggacc
atagcccagatgctggcgccggtggcaaagaaggtggtcggtgtggagatcgtcggagaa
gccgtggaggcggccagggaaaatgccggtttgaatggacttgataactgtgaatttatc
gcaggggatgtgctgaaggtgatcgatgagctggaagacaaacctgattttatcgtgctg
gacccgccccgggatgggatacacccgaaagcgatccagaagatcattgactttggggtg
gagaagatggtttatatcagctgtaagccaaccagcctggcgagagatttggagatcttt
cgggaggcggggtatgaagtagagagagggggatgcgtggatatgtttccttcgacggtg
catgtagaagttgtgtgtttgctttccaaacttaaatcggataaacatatagaggtggaa
gtaaagatggatgagcttgatttgacagtggcagagagtaaggtcacttataatcagatt
aaggagtatgtgttagagaagacaggtcttaagatatctaatctgtatattgctcaggta
aaacaaaaatgtggtattattgagcgtgaaaattacaataaaccgaagaatgaagaggta
aaaccaccaatatgtccattggaaaaagaaaaagcaattatggcggcactgaaatatttt
aaaatgatatag
DBGET
integrated database retrieval system
