Actinoalloteichus fjordicus: UA74_00385
Help
Entry
UA74_00385 CDS
T04639
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acad
Actinoalloteichus fjordicus
Pathway
acad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UA74_00385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acad03400
]
UA74_00385
Enzymes [BR:
acad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
UA74_00385
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UA74_00385
DNA repair and recombination proteins [BR:
acad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UA74_00385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
DUF7577
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
APU12176
UniProt:
A0AAC9L7D7
LinkDB
All DBs
Position
87652..88515
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEIEAIVHYLREHAVGRTINRVDIASLAALKTAAPPWTELHGRPVRQADRHGKFLD
LDCDGLHLVIHLARAGWLRWADVLAAAPPRPGRGPLAVRVHLGPPGSGPGFDLTEAGTRK
GLAVWVVRSPSEVPGIENLGPDAATLDQPGLAEVLRGHTERLKTVLTRQSILAGLGNAYS
DEVMHAARLSPYATAGRLTAEEIDRLHAALEMVLSDAVHRSIGLEAARLKSEKRSGLRVH
GRTGLPCPICGDTVREVSFADRSFQYCPTCQTGGRTLADRRRSRFVK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttccggagatcgaggcgatcgtccactacctgcgggaacatgcggtcggg
cggacgatcaaccgggtcgacatcgcgtcgctggcggcattgaagacggccgcgccgccg
tggaccgagctgcacggcaggccggtgcggcaggccgaccgccacgggaaattcctcgat
ctcgactgcgacggtctgcacctggtgatccacctggcgagggcgggctggctgcgctgg
gcggacgtgctcgccgccgccccgccgaggcctggtcggggtccgctggccgtccgagtc
cacctgggcccgccgggcagcgggccgggattcgacctcaccgaggccggaaccaggaag
ggactcgcggtctgggtggtgcgcagcccgtcggaggtgccggggatcgagaatctcggg
ccggatgcggcgactctcgaccagccggggctggccgaggtgctgcgtggacacaccgag
cgactcaagaccgtcttgaccaggcagtcgatcctggcgggactgggcaatgcctactcc
gacgaggtgatgcacgctgcgcggctctcgccttacgcgacagcgggccgcctgacggcg
gaggagatcgaccggctgcacgccgcgctggagatggtgctctccgacgcggtacatcgc
tcgatcggtctggaggcggcccggctcaagagcgagaagcgctccggtctgcgggttcac
gggcgtacggggctgccctgcccgatctgcggtgacaccgtgcgggaggtgtccttcgcc
gaccgctcgttccagtactgccctacttgccagaccggggggcggacgctcgccgaccgg
cgacgttcgcggttcgtcaaatag
DBGET
integrated database retrieval system
