Actinoalloteichus fjordicus: UA74_05910
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Entry
UA74_05910 CDS
T04639
Name
(GenBank) RHS repeat-associated core domain
Organism
acad
Actinoalloteichus fjordicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TreTu_C
PT-HINT
Laminin_G_3
DUF6531
Hom_end_hint
Hint
Vint
AXH
Motif
Other DBs
NCBI-ProteinID:
APU13256
UniProt:
A0AAC9L9E5
LinkDB
All DBs
Position
1312141..1321590
Genome browser
AA seq
3149 aa
AA seq
DB search
MATAVGLFAGLIGPAASELALREQQELLRSMVDPASIPSPEQAWGMAADLPTQEGERDDD
DLWPRSALADHPQLEMPPTPEAEPNTAEPVAATAPEAAGFDPETSRELPDERAELERTFA
NADGTLTTEFSQEPVNFLDEQGSWQPVDPTLVEVEGGGWRNSADSVDIRIAPEASGTISE
FTVADGGTVGLALEQADAVAGVADGDLVAYAEVRPGVDVEIESRPGGVTQRLILHSAEAA
QDVVLPLRTSDLTASLVDGSAVLADEAGAEQALIAVPTTTDANRDDRSGDYRDPGTSEIE
LVEGEAGEQALRVVVDSEWLADPAREFPVIVTASVETLADHDGAGSTDSVSVMRDGSGST
WKEANDEIKVGTVGSGVDRIQSAGYLKFGGVETRLRNHRILGARLNLHNFHSYSCQPRRV
TVHGVTAPWSSGDSLGYPGPAHGSSLGSANFAYGHIVSGSTTSNCPNSWAGISLGSGGTD
LIQGWVSGSRPNHGLTVRASESDVFGWKRFTSHRTANPPRLSITHSPYDADYRFVEAVPE
PPVTRTQGGTIQLEVTNRGAQTWTPSTYALEYRLFRANGSIISTRPAARLTGDVPRGSSV
TLEANINPLEPGDYWLDFTMRRTGSTFFTDHQVPPARLALRTFEIPPVLTAQYPHNGHLA
PTLTPQLWAAAIDVDAPPDASLDFKFEICGDGACHDSGWQDSQTWTVPEGLLRWSQEYTW
KAFAGDGATESEAVGDSTLITAVPQPEITAHLGNAPYSANVRDFDAQVGNYFSSAMDVSV
RTAGPALNVLRTYNSLDPRRDLAFGSGWASTYDMRVVPDADGSGNVVVTYPDGQQVRFGR
NPTGTFSAPQGRYASLSAVPEGGWALFDKSRTTYRFNDAGRLTSILDAHFRAMNLGYDSA
GLLQTASSRPGGRSLHFTWADGHVTSVTTDAVDGEALRWTYAYDGDRLVEVCDPTDGCTR
YDYTEGSHYRTTVLDSRPDSYWRLGEPGGAVATSQVGLHLGEDDGTHHGVELGVPGALSG
TGETAARFDGTASRVALPAGAVRKSRDLAIELWFRTTDSGPLVGFQTREFGSSPGGSLPA
LYVGTDGRLYGQWWQGEAEPIGTTETVNDGEWHHAVLSGSLATQTLYLDGAEVGSRDGEI
DMFHTHGQLGVSYQVGDDDWPGWPGQSPWYFEGDIDEVALYQRPLGLPAVQAHYAAAATS
AQLVELTLPSGRIAGQITYDDVNERVSEYTDRDGGTWRLGVPHYGGSTDNPIRSTDLADP
AGRQHHYDFDPLHGRALRYVSPVGLTVREEDLPPDAEPVDPPDCDLTEEGFCSIPVRPGD
DWGNAQPVQGQGVRTLTYDESGFQQTITDELGQQVTFTNDERGNRLSTRTCRTSNADCHT
TRYSYFLNPGQMMDPRNDRLIAVRDGRSSGADDDRFRTTYTYDNDGELITEVAPDGGTTR
HTYSEGGEAAIGGGNVPAGMLLASTDANGAVTSRAYYSSGDLAEVTLPSGLRTRYTYDAL
GRTVVETEFSDSFPDGVTTTTAYDALSRPVETIAPATTNAVHDTGHLLHTTTAYDADGNT
VRVATQDGPEGDPRVSTVDFNEQGRAERVTDPEGGETSYGYDHFGNNTWTVDAAGNRFEY
AYTPTNQIAEVRLRGWNGDPEDVEEQPQDYLVLEANTYDRSGRRAYHSDAMGRLTHFEYF
YDGLLRRVTHLDVADPDGGERDIVAQENTYDAAGNLIGQVDAEGLDTEITVDAVGRITRT
DTAGPRRSSAFTHDPVGNVTSVTHAGVNSNVPGLGAASPHVTEFEYDEAGRPVTETVVND
GERLTTRRAFDQRGLLITETDPRGAVQDADPAAFTTDLAYDEVGRLVSVTAPPVPVEKPG
APAETIRPTAVTGYNAFGEVVAQRDPNGEITEFDYDDLGREIRLSSPSYLPPGSDEPIRL
STETSYDALSNVLSVTDGAGNSTRFVYDQLSRLTEVHDPPRVDGAEPGVWQYTYTRVGEL
LSATDPTGARVEATYDDLGRQITHTALERHPTTGAFTTDLRYDDVGNLLSTTDPSGDTTT
YEYDVLYQPIRTIDAAGVRTETGYDALGRPLRAVDGAGRVTLARYDQAGRILTETSRDPE
SNARLRETSFTHDAAGNQTGVTDPVGATSTFVYDALGRVVEQTEPVAEGESITTSLGYDA
AGNPTRFTDGRGHATYTGYNSLGLVESVIEPATEAHPAAADRTWTTAYDVVGDPVRMVSP
GGVTRDRVFDALGNLVRENGSGAEAPTGERVLDYDALGRVTAAGTPAGLNTYGYDDRGNL
VTAGGPGGVAQFGYDASGRPVSRIDDAGQATFSYDDGRLASVADGLTGVGQELGYDEAGQ
LSSIDYGDGRVRALIYDEFGRQTGDVLTDAGGAEITAIEYGFDLADRLTSKTTSGTAGAG
ENTYGYDLAGRLTSWASPAGETTEYDWDGAGNRIAVGDKTAAYDERNRLLSDGDYTYEHT
ARGTVAGRDSSGLVEEFSFDAFDRLIARGGTTYDYDALDRVVARNGVGGFSYAGLSIEPV
SDGASVFGRGPDDELLAWSDADAVALAVSDRHGDVIGGLPVTGAALTGSRAYDPFGQVVD
TAGSTGIIGFQGDWTDPDTGMTNMGARWYDPASAAFLSRDDIDLPSSPSILTNRYTYGAG
APTNFVDPDGHLPWAVWLAIEAAKQAAKYCARNPRKCADAGNSIVDGISNAWDSMTNRKV
PGSASAAPPSTNGWYDQANNNCFPTCAASGNNGGGWGHWFTSFWAGMNWSSGSGGGSGFW
YLSGPGSGSGGGTWTYYVPPPPDPAIEARRLNRENAIENPVALPDGWDDPWYGDGPEPSV
STSPSLPAWAVGDLSDRVEDVAASYEQLQRDLLDSSGPVITNISVHDQAPSEVSYTDPTN
LTDAGSCDTSNSFAAGTEVLMADGSTKPIEDVGVGDEVLATDPTTGETSVQLVTATIVGD
GVKQLVDVTIVTEDGSTDTITATAEHPFWVADLDAWVNAEDLEPGHRFETADHRDASVSV
VDAYDAPRQVHNLTVGRLHTYYLLAGQTPVLVHNSGGHSPDDGMVTVGRWMSGAEHQAMM
ETGMVQRGGGGFTYVVYPASRDAYISARPGSVYAEFDVPQSSLIPGGRPGDFKMSDSDTI
FARLAQKKGNPVPQLPEAKNIKLGGWGCS
NT seq
9450 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggtcggactgttcgccgggctgatcggccctgccgcgtcggagctggcg
ctccgcgagcagcaggagctgctgcggtcgatggtggacccggcgtccatcccgtctccg
gagcaggcctggggcatggcggcggacctgccgactcaggagggcgagcgggacgacgac
gacctctggcctcgatcggcgttggccgaccatccgcagctcgagatgcctccgactccc
gaagccgagcccaacaccgcggaaccggtggcggccaccgcgcccgaggccgccggtttc
gatccggagacgagccgggagctccccgacgaacgggccgagctggagcgcaccttcgcc
aacgccgacgggaccttgaccaccgagttcagccaggagccggtgaacttcctcgacgag
cagggctcatggcagcccgtcgatccgacgttggtggaggtcgagggcggcggctggcgc
aactccgccgactcggtcgacatccggatcgctccggaggcgtcgggaacgatctcggag
ttcaccgtcgcggacggcggcacggtcgggctggcgctcgagcaggccgacgcggtcgca
ggcgtggccgacggcgatctggtcgcctatgccgaggtccggccgggtgtcgacgtcgag
atcgagtcccggcccggcggggtgactcaacggctgatcctccacagtgccgaggcggca
caggacgtggtgctgcccctgcgcacctcggacctgacggcctcgctcgtcgacggatcg
gccgtgctcgccgatgaggctggtgctgagcaggcgctcatcgccgtgccgaccaccacg
gatgcgaaccgggacgaccgctccggcgactatcgggaccccggcacctcggagatcgaa
ctcgtcgagggcgaggcgggggagcaggctcttcgggtcgtcgtcgactctgagtggctg
gctgatccggcccgcgagttccccgtgatcgtgaccgcgtccgtcgagacgctggccgac
cacgacggagcgggcagcaccgacagtgtgtcggtgatgcgcgacggcagcgggtccacc
tggaaagaggcgaacgacgagatcaaggtcggcacggtcggctctggcgtggaccgaatc
cagagcgccggatacctcaagttcggtggcgtggagacacggctgcggaatcaccgcatc
ctgggcgcccggctcaacctgcacaacttccactcgtactcctgccagcctcgacgggtg
acggtgcacggcgtgacggcaccgtggtcctcgggagactccctcggctatcccggcccg
gcgcacggctcgtcgttgggcagcgcgaacttcgcctacggccatatcgtcagcgggtcg
accacctccaactgcccgaacagctgggcgggaatcagtctcggctccggcgggacggac
ctgatccagggctgggtgtcgggttctcgaccgaatcacggtctgacggtgcgggcctcc
gagtccgatgtgttcggctggaagcgcttcacctcgcatcgcaccgcgaacccgcctcgg
ctgtcgatcacccacagcccgtacgacgccgactatcgcttcgtcgaggccgttcccgag
ccgccggtgacgcggacccagggcgggacgatccagctcgaggtcaccaaccgaggcgcc
cagacctggaccccgtcgacctatgcactcgaataccggctcttccgggccaacggctcg
atcatcagcacccggcccgccgccaggttgacgggcgacgtgccgcgcggatcgtcggtg
acgctggaggcgaacatcaatcccctagaaccgggggattactggctcgacttcacgatg
cgccggaccggcagtaccttcttcaccgatcaccaggtgcccccggcccggctggcgctg
cgcaccttcgagatccccccggtgttgaccgcgcagtatccgcacaacggccatctcgcg
ccgacgctgacgccgcagctgtgggcggcggcgatcgacgttgacgcgcccccggacgcg
tcgctggacttcaagttcgagatctgcggagacggcgcgtgccacgactcgggctggcag
gacagccagacctggacggtgcccgagggactgctgcgctggtcgcaggagtacacctgg
aaggccttcgcaggcgacggcgcgacggagagcgaggccgtcggggacagcacgctgatc
acggccgtgccgcagccggagatcaccgcgcacctgggcaacgccccgtacagcgcgaac
gtccgcgacttcgacgcgcaggtcggcaactacttctcctccgcgatggacgtgtcggtc
cgcaccgccgggcctgcgctcaatgtgctgcggacgtacaacagtctcgatccgcgtcgg
gacctggccttcggttccggctgggcgagcacctatgacatgcgggtggtgcccgacgcg
gacggctcgggcaacgtcgtcgtcacctaccccgacggccagcaggtgcggttcggtcgg
aacccgaccgggaccttctccgcgccacagggcagatacgccagcctcagcgccgtgccg
gagggcggctgggcgctgttcgacaagtctcggaccacctatcggttcaacgacgccggt
cggctgaccagcatcctcgacgcgcacttccgcgcaatgaacctcggttacgactcggcc
ggtctactccagacggcatcgagcaggccgggcggccgctccctgcacttcacctgggca
gacgggcatgtgacctcggtgacgaccgacgcggtcgacggcgaggcactccgatggacc
tacgcctacgacggtgaccggctggtcgaggtctgcgatcccaccgacggctgcacccgc
tacgactacaccgaaggctcccactaccggaccaccgtgctggactccagaccagactcg
tactggcggctgggcgaaccgggcggagcggtggcgacgagccaggtcggcctgcacctc
ggggaggacgacggaacgcaccacggcgtcgaactcggggtgccaggagcgttgagcggc
accggcgagacggccgcgcgcttcgacggcaccgcctcccgggtggcgctcccggcgggc
gcggtgaggaagagtcgagacctcgcgatcgaactgtggttccggaccaccgacagcgga
ccgctggtcggcttccagaccagggagttcggcagctcccccggtggatcgctgcctgcg
ctgtacgtcggcaccgacgggcgcctgtacgggcagtggtggcagggcgaggccgagccc
atcggcaccaccgagacggtgaacgacggcgaatggcatcacgcggtgctctccggttcg
ctggcgacgcagaccctctacctggacggggcggaggtcggcagccgcgacggcgagatc
gacatgttccacacccacggccagctcggcgtctcctaccaggtcggcgacgacgactgg
cccggctggcccgggcagtcaccgtggtatttcgagggcgacatcgacgaggtcgccctc
taccagcgcccgctcggcctgcccgccgtccaggcgcactacgccgccgcagccacctcg
gcccagctcgtcgaactgacgctgccgagcggccggatcgccggacagatcacctatgac
gacgtcaacgagcgggtctccgagtacaccgatcgggacggcgggacctggcgtctcggg
gtgccccactacggcggcagcactgacaatccgatccgcagcaccgacctggccgatccc
gccggtcgtcagcaccactacgacttcgacccgctccacggccgagcactgcgctacgtc
tcgccggtcggcctgaccgtccgcgaggaggacctgccgccggacgcggaaccggtggac
ccgccggactgcgacctcaccgaggaggggttctgcagcatcccggtgcgtccgggagac
gactggggcaacgcccagcccgtccagggccagggcgtgcgcacgctgacctacgacgag
tccggtttccaacagaccatcaccgacgaactcggccagcaggtcaccttcaccaacgac
gaacgaggaaaccggctgtccacccgcacctgtcggacctccaacgcggactgccacacg
acgcggtacagctacttcctcaatccggggcagatgatggacccgcgcaacgaccggctc
atcgccgttcgtgacgggcgatccagcggcgcggacgacgaccgcttccgcaccacctac
acctacgacaacgacggcgagctgatcaccgaggtcgccccggacggcggaaccacccgc
cacacctacagcgaaggcggcgaggccgcgatcggcggcggcaacgtcccggccggaatg
ctgctcgccagcaccgatgcgaacggagcggtcaccagccgggcgtactactcctcgggc
gacctggccgaggtcacgctgccgagcggtctgcgcacccgctatacctacgacgccctg
ggccggacggtcgtggagacggagttctccgactcgttccccgacggggtcaccaccacg
acggcctacgacgcgctgtcgcgcccggtggagacgatcgcgcctgcgaccacgaatgcg
gtgcacgacaccggtcacctgctgcacaccaccacggcctacgacgccgacggcaacacg
gttcgcgtcgcgacccaggacggccccgagggcgatccgcgcgtcagcacggtcgacttc
aacgagcagggccgcgcggagcgggtcaccgaccccgagggcggcgagaccagctatggg
tacgaccacttcggcaacaacacctggaccgtcgacgccgcaggcaaccgcttcgaatac
gcctacacgccgacgaaccagatcgccgaggtgcgcctgcgcggatggaacggcgacccc
gaggacgtcgaggagcagccccaggactacctggtcctggaggcgaacacctacgaccgg
agcggccgccgtgcctaccacagcgatgccatgggcaggctcacccacttcgagtacttc
tacgacggtctcctacgccgcgtcacgcacctggacgtcgccgaccccgacggcggcgag
cgggacatcgtcgcccaggagaacacctatgacgcggccggaaacctgatcgggcaggtc
gacgccgaaggcctcgacaccgagatcaccgtggacgcggtcggccggatcacccggacc
gataccgcaggcccccgccgttcctcggccttcacccatgaccccgtcggcaacgtcacc
tccgtgacccacgcaggcgtcaactccaacgttcccggcctcggggcggcctcgccgcac
gtcaccgagttcgagtacgacgaggcgggcaggccggtcaccgagaccgtcgtcaacgac
ggcgaacggctgaccactcggcgggcgttcgaccaacgcggtctcctcatcaccgagacg
gacccgcgtggcgcggtccaggacgccgatccggccgcattcaccaccgatctcgcctac
gacgaggtgggcaggctggtgtcggtgacggcgccgccggtcccggtcgagaagccgggg
gcgcccgcagagacgatcaggccgacggcggtcaccgggtacaacgccttcggcgaggtc
gtcgcccagcgcgatcccaacggggagatcaccgagttcgactatgacgatctaggccgg
gagatccggctttcgtcgccgtcctaccttccgccgggttccgacgagccgatccggttg
tcgaccgagaccagctacgacgcgctgtccaacgtgctgtccgtgacggacggggcgggg
aactcgaccaggttcgtctacgaccagctgtcccgactgaccgaggtgcacgacccgccc
cgcgtcgacggcgcggagccgggggtgtggcagtacacctacacccgcgtcggcgagctc
ctctcggccaccgacccgaccggggcgagggtcgaggcgacctacgacgatctcggcagg
cagatcacgcacaccgccttggaacggcatccgaccaccggggccttcaccaccgacctt
cgctacgacgacgtcggcaacctgctcagcaccaccgatccgagcggcgacaccacgact
tacgagtacgacgtcctgtatcagccgatccgcacgatcgacgcggcaggcgtgcgcacc
gagaccgggtacgacgcactcggacggccgctgcgggccgtggacggagcaggccgggtc
accctggcccgctacgaccaggcggggcggatcctgaccgagacgagccgggacccggag
agcaacgcgcggctgcgcgagacctccttcacccatgacgcggcgggcaaccagaccggt
gtgaccgatccggtgggggcgacgagcacgtttgtctacgacgcgttgggtcgggtggtc
gagcagaccgagccggtcgccgagggcgagtcgatcacgacgtcgttgggttatgacgcg
gcggggaatccgacgcggttcaccgacggccggggtcatgccacctacaccggttacaac
agtctcgggctggtggagtcggtgatcgagcctgccaccgaggctcatccggcggcggcg
gatcgcacctggaccacggcgtacgacgtcgtgggtgatccggtgcggatggtctcgccg
ggtggggtgactcgtgatcgggtgttcgacgccctgggcaacctggtgcgggagaacggc
tctggagcggaagcgccgaccggtgagcgagtcctggactacgacgcgctggggcgcgtg
accgcagcgggaacgcctgcggggttgaacacctacggctacgacgaccgagggaacctg
gtcacggcgggcgggccgggcggggtggcgcagttcggctacgacgcctcgggcaggccg
gtgtctcggatcgacgatgccgggcaggcgacgttctcctacgacgacggcaggctggca
tcggtggccgacgggctcaccggcgtggggcaggaactgggttatgacgaggccgggcag
ctgtcgagcatcgactacggcgacggccgggttcgtgcgctgatctatgacgagttcggc
aggcagaccggggacgtcctcaccgacgcgggcggggcggagatcaccgcgatcgagtac
ggcttcgatctggccgaccggctgacgtcgaagacgacctcggggaccgcaggggcgggg
gagaacacctacggctacgacctggcagggcggttgacgtcgtgggcttcgcctgcgggc
gagacgaccgagtacgactgggatggcgctgggaaccggatcgcggtcggggacaagacg
gccgcttatgacgagcgcaaccgcctgctctccgacggcgactacacctatgagcacacc
gcccgaggcaccgtggccggtcgggacagctccgggttggtggaggagttctccttcgac
gccttcgaccggctgatcgcccgaggcggcacgacgtacgactacgacgcgctggaccgg
gtggtcgcccgcaacggcgtgggcgggttctcctatgccgggctcagcatcgagccggtg
tccgacggcgcttcggtcttcggccggggcccagacgacgagttgttggcctggtctgat
gcggacgcggtggcgttggcggtctcggaccggcacggggacgtgatcggcggactgccg
gtcaccggcgctgccctgaccggctcccgcgcctacgaccccttcggtcaggtcgtcgac
acggccggatcgaccgggatcatcgggttccagggcgactggaccgaccctgacaccggc
atgaccaacatgggcgcccgctggtacgaccccgcgagtgccgcgttcctgtctcgggac
gacatcgacctcccgagcagcccgtcgatcctgacgaaccggtacacctacggggcgggg
gcgccgacgaacttcgttgacccggatgggcacctaccttgggctgtgtggcttgccatc
gaagccgcgaaacaagcggcgaagtactgcgcgaggaatcccaggaagtgtgccgacgca
ggaaattcgattgtggacgggatcagtaacgcctgggattcaatgacgaaccggaaggtt
cccggttcggccagcgcggctccgccttcaaccaacgggtggtatgaccaggcgaacaac
aactgcttcccgacgtgtgcagcgtctggcaacaatggtggcgggtggggacactggttc
acgagtttctgggctgggatgaactggagttccggcagcggcggcggatctggattctgg
tacctctccgggcctggttccggctccggcggtgggacctggacctactatgtaccgccg
cccccggacccggcaatcgaggcacgccgactgaaccgcgagaacgcaatcgagaacccg
gtggcgttgccggacggctgggacgacccgtggtacggcgacggtcctgaaccgtcggtg
tcgacgtcgccgtcgttacctgcgtgggcggtcggggatctgtcggaccgagtggaggac
gtggctgcgtcctacgagcagttgcagcgtgatcttctcgattcctcggggccggtgatc
acgaacatctccgtgcacgatcaggctccgtcggaggtctcctacaccgatccgacgaac
ctcaccgatgccggctcctgcgatacgtcgaacagcttcgctgcgggcaccgaggtgctc
atggcggacgggtcgacgaagccgatcgaggacgtcggggtcggtgacgaggtcctggca
acggacccgaccacgggcgagaccagcgttcagctggtgacggcaacgatcgtcggcgac
ggcgtcaagcagctggtcgacgtcaccatcgtcaccgaagacggcagcacggacacgatc
accgcgacggccgagcacccgttctgggtcgcggacctggacgcctgggtcaacgccgag
gacctggagccgggccaccgcttcgagacggcggatcaccgggatgcctcggtctctgtc
gtcgatgcctacgacgcgccacggcaggtacacaacctcaccgtcggtcgactgcacacg
tactatctactcgctgggcagacaccagtcctcgttcacaacagcggtggccactcccca
gacgacgggatggtgactgttggacgttggatgtctggggcagagcatcaggcgatgatg
gagaccggaatggttcaacgtggtgggggtggtttcacctacgttgtgtatccggcaagt
cgtgacgcatacatatcagcacgtccgggatccgtttacgcagaattcgacgtgccacaa
tcttcacttattcctggcggcaggccgggggacttcaagatgtcagattctgataccata
tttgctcgtctggcgcagaagaaggggaaccctgttcctcaactccctgaggcgaagaac
atcaagctgggaggatggggatgttcctag
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integrated database retrieval system
