Actinoalloteichus fjordicus: UA74_06985
Help
Entry
UA74_06985 CDS
T04639
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
acad
Actinoalloteichus fjordicus
Pathway
acad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UA74_06985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acad03021
]
UA74_06985
03019 Messenger RNA biogenesis [BR:
acad03019
]
UA74_06985
Transcription machinery [BR:
acad03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
UA74_06985
Messenger RNA biogenesis [BR:
acad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UA74_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
APU13466
LinkDB
All DBs
Position
1548457..1550499
Genome browser
AA seq
680 aa
AA seq
DB search
MSNTELLSGEAATAGSAAGQTETGEPSSRQDVAGQGDVVTQSNGTPARRRGGLSGMVLAE
LRQLAGELGISDTTGMRKGDLIAAIRERQGGSTRRTSAPQAEAPAQLAVEIPEKPATPKA
ETPQPTKTEDAPAQSGGEAEEEGGRRGRRRRSSTRSAGSQEQTDGRGDRSTGEDRAERNG
RDDRGGERQERGEGRGRGERQERGEGRDRGEGRDRGEGRERGENRDRGERQERGEGRDRG
EGRDRGEPRDSRDNRDDDDDEAGGGRRRGRRFRDRRRGRTRTEGGSGGGGGVANEPEVRE
DDVLLPVAGILDVLENYAFVRTSGYLAGSNDVYVSLSLVRKYGLRRGDAITGAVRQPRDN
EQQRQKFNPMVRVDTINGLEPDAVRNRPEFTKMTPLYPNERLRLETEPHVLTTRVIDLVM
PVGKGQRALIVSPPKAGKTMVLQAIANAITTNNPECHLMVVLVDERPEEVTDMQRSVKGE
VIAATFDRPPADQTTVAELAIERAKRLVELGFDVVVLLDSITRLGRAYNLAAPASGRILS
GGVDSTALYPPKRFLGAARNIENGGSLTIFATALVETGSTGDTVIFEEFKGTGNAELKLD
RKLADKRTFPAVDVDASSTRKEELLLSPDELAVTHKLRRVLAALDDQQALDLVLTQLRKT
RTNIEFLMQVAKSTPGNGDQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacaccgaattgttgagcggcgaggcggccaccgccggatcagccgcgggccag
acagagacgggtgagccgagttcacgccaggacgtcgcaggtcagggggatgtcgtgact
cagtcgaatggcacgcctgcccgtcgtaggggcggcctgtccgggatggtgctggccgag
ctgcgccagctcgcgggcgagctgggcatctccgacacgaccggaatgcgcaagggggat
ctgatcgccgcaatccgggaacgccagggcggttccactcggcggacttccgcgccgcag
gccgaggcgcctgcgcagttggcggtcgagatcccggagaagcctgccactcccaaggca
gagactccgcagccgaccaagaccgaggacgcccctgcccagtccggcggagaggccgag
gaggagggcggtcgtcgcgggcgccgtcgtcgctcgtcgacccgctcggcaggcagccag
gagcagaccgacggtcgaggcgaccgttccacgggcgaggaccgtgccgagcgcaacggt
cgcgacgaccgtggcggcgagcgccaggagcgcggcgagggccgaggccgtggcgagcgt
caggagcgcggcgagggccgcgaccgcggtgagggtcgggaccgtggcgagggccgcgag
cgcggcgagaaccgggaccgtggcgagcgtcaggagcgcggcgagggccgcgaccgtggc
gagggccgggaccgtggcgagccgagggactcgcgggacaaccgcgacgacgacgatgac
gaggcaggcggcggcaggcggcgcggcaggcgcttccgcgaccgcaggcgtggccgcacc
cgcaccgagggtggcagcggcggcggcggcggtgtcgcgaacgagcccgaggtccgcgag
gacgacgtgctgctcccggtcgccggaatcctggacgtgctggagaactacgcgttcgtc
cgcacctcgggatacctggccggatcgaacgacgtctacgtctcgctgtcgctggtgcgc
aagtacggcctgcgtcgcggtgacgcgatcaccggcgcggtgcgccagccgcgcgacaac
gagcagcagcggcagaagttcaacccgatggtccgggtcgacacgatcaacggcctggag
ccggacgcggtccgcaaccggcccgagttcaccaagatgacgccgctgtacccgaacgag
cggctgcggctggagactgagccgcacgtgctcacgactcgggtgatcgacctggtgatg
ccggtcggcaagggccagcgggcgctcatcgtctcgccgcccaaggcgggtaagacgatg
gtgcttcaggccatcgcgaacgccatcaccacgaacaaccccgaatgccatctgatggtc
gtgctcgtcgacgagcggcctgaagaggtcaccgacatgcagcgctcggtcaagggcgag
gtcatcgcggccacgttcgaccggccgcccgcagaccagaccaccgtcgcggagctggcg
atcgagcgggccaagcggctggtggagctgggcttcgacgtcgtcgtgctgctggactcg
atcacccgactgggccgggcctacaacctggccgcgcccgcctcgggccggatcctctcc
ggtggtgtcgactccaccgcgctgtacccgcccaagcggttcctgggtgcggcgcgcaac
atcgagaacggcggctcgctcaccatcttcgccaccgctctcgtggagacgggatcgacc
ggtgacacggtgatcttcgaggagttcaagggcaccggcaacgccgagctgaagctcgac
cgcaagctcgccgacaagcggaccttcccggccgtggacgtcgacgcgtcgagcacgcgg
aaggaggagctgctgctctcgccggacgagctggccgtgacgcacaagctgcgtcgggtg
ctggccgcgctggacgaccagcaggcgctcgacctggtgctcacgcagctccgcaagacc
cgtaccaacatcgagttcctcatgcaggtggccaagagcacaccgggcaacggcgatcag
tga
DBGET
integrated database retrieval system
