Alkalicella caledoniensis: HYG86_01410
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Entry
HYG86_01410 CDS
T07204
Name
(GenBank) helicase-associated domain-containing protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
acae
Alkalicella caledoniensis
Pathway
acae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HYG86_01410
09124 Replication and repair
03420 Nucleotide excision repair
HYG86_01410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acae03021
]
HYG86_01410
03400 DNA repair and recombination proteins [BR:
acae03400
]
HYG86_01410
Enzymes [BR:
acae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYG86_01410
Transcription machinery [BR:
acae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HYG86_01410
DNA repair and recombination proteins [BR:
acae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HYG86_01410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_3
ResIII
ERCC3_RAD25_C
Helicase_C
EAD7
Motif
Other DBs
NCBI-ProteinID:
QNO13517
UniProt:
A0A7G9W4A5
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All DBs
Position
complement(275852..277525)
Genome browser
AA seq
557 aa
AA seq
DB search
MYSKPLIVHIDGTIFLNNSMDPDGRLAQTLTEFTDLIKMPEGVYTFKLTSFSLWSAAAKG
YVAAEVISFLKSYSHNKLGLYLEEKINYVMNQYRRLRLCESENYLALIAKDEKIIKDILS
DKSISKLLVSKGIHNTLYFKMSDKIELKQLLFKIELYAIDETNKVGRSLDINFLRTTRSG
KEFTLRDYQLEAAESYLDNNASVGGGGVVIMPPRSGKTCVGLKIVESLNMTTLIITENEV
SSEKWKQEIVDKMDLSENSIELYKKEPHKVAPITITDYAYITSDRKAFDLLNSYEWGLVI
FDDVHRLPAKTYIETANFESKHKLALAATLERSDNQGNMVYAVVGPKWYELLPQTLRTLG
YLKSIECVEVKVPLSEKDKELYLYSEKNNLGNYKLREIAAFNAMKKEALNVLINPHKRTL
IASFYKDLAKKISDEYNINYIGDESDLTTRLQVVEKFNKDEINSLIYTLLGVQFEFTNID
TLISVSYRQASTNEEYLRLGKLMEIDKCSEVAKFISIISTDTVEESDYRLRRKSLINYGF
RFSIFDLADLQKGGVDS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtaagcctttgatagttcatatagacggaacgatatttttgaataatagtatg
gatccagatgggcgcttggcgcagacgctaaccgaatttacagacctaattaaaatgcct
gagggggtttatacttttaagttaacttctttttcattatggtcagctgctgctaaagga
tatgtagctgcagaggttatatcttttctgaaatcctacagccacaataagcttggactg
tatttagaggaaaaaataaactatgtaatgaaccagtacaggagactgagattatgtgag
tctgaaaactatttagctttgattgccaaggatgaaaagataataaaggatattctaagt
gacaaaagtatcagcaagcttttggtttccaaaggaatacataatactctatattttaag
atgtcggataagatagaactaaaacaactgctgtttaagattgagttatatgctattgat
gagacaaataaagttggacgctccttagatattaactttcttagaactactagaagcggt
aaagagtttacattaagagattaccaactagaagcagcagaaagttatctagataacaat
gctagtgttggcggtggtggggtagtaatcatgcctcctaggtctgggaaaacttgcgtg
ggattaaagatagtagagagtcttaatatgacaactctaattattacagaaaatgaagtt
agttctgaaaaatggaaacaggaaatagttgataaaatggatttaagtgaaaatagtatt
gagttatacaaaaaggaaccacataaagtagcccctataacaattacagattacgcatat
ataactagtgatagaaaggcattcgatctgttgaatagttatgaatggggcttggtgatt
tttgacgatgttcatcggttgcctgctaaaacgtatattgaaactgccaattttgaatct
aaacataagcttgctctagcagcaacattggaaagaagcgataatcaaggaaatatggtt
tatgctgttgtagggccaaagtggtatgaattactccctcagacattaagaacgcttggc
tatttaaaaagtatagagtgcgtagaagtaaaagttcctctgtcggaaaaagataaagaa
ctctacttatatagcgaaaagaacaacttgggaaactacaagttaagagagatagcggcg
ttcaacgctatgaaaaaagaagcgctaaatgtcttaattaaccctcataaacggacccta
atagcatctttttataaagatttagccaaaaaaataagtgatgagtataatataaattat
attggtgatgaatcggaccttacaacacgattacaagtagttgagaagtttaacaaagat
gaaataaacagtttaatttatacgctgttaggggtgcaatttgaatttactaatatagat
acattaatctctgtgtcctatcgacaagcttcaactaatgaagagtatttaaggttagga
aagttgatggaaatagataaatgtagtgaagtggctaaatttatttcaataatttcaact
gataccgtagaagaaagtgattataggcttagacgtaaaagtttaattaactatgggttt
agatttagtatctttgatttggcggatctacaaaaaggaggggtagattcttga
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